RNA–Protein interactions for RNA: ENST00000343028.8

TM7SF3-201, Transcript of transmembrane 7 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM7SF3, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-201ENST00000343028 KRTAP4-6Q9BYQ5 205 aa6.7□□□□□ -1.34
TM7SF3-201ENST00000343028 KRTAP4-3Q9BYR4 195 aa6.58□□□□□ -1.36
TM7SF3-201ENST00000343028 DSTQ03001 7570 aaKnown RBP6.56□□□□□ -1.36
TM7SF3-201ENST00000343028 MACF1Q9UPN3 7388 aaKnown RBP6.45□□□□□ -1.38
TM7SF3-201ENST00000343028 MT1GP13640 62 aa6.41□□□□□ -1.38
TM7SF3-201ENST00000343028 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
TM7SF3-201ENST00000343028 KRTAP2-3P0C7H8 128 aa6.39□□□□□ -1.39
TM7SF3-201ENST00000343028 KRTAP2-4Q9BYR9 128 aa6.39□□□□□ -1.39
TM7SF3-201ENST00000343028 KRTAP2-1Q9BYU5 128 aa6.39□□□□□ -1.39
TM7SF3-201ENST00000343028 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
TM7SF3-201ENST00000343028 KRTAP19-3Q7Z4W3 81 aa6.36□□□□□ -1.39
TM7SF3-201ENST00000343028 MT1MQ8N339 61 aa6.35□□□□□ -1.39
TM7SF3-201ENST00000343028 SPRR2FQ96RM1 72 aa6.34□□□□□ -1.39
TM7SF3-201ENST00000343028 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
TM7SF3-201ENST00000343028 MDN1Q9NU22 5596 aa6.2□□□□□ -1.42
TM7SF3-201ENST00000343028 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.42
TM7SF3-201ENST00000343028 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
TM7SF3-201ENST00000343028 SYNE1Q8NF91 8797 aaKnown RBP6.02□□□□□ -1.45
TM7SF3-201ENST00000343028 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.92□□□□□ -1.46
TM7SF3-201ENST00000343028 LCE3BQ5TA77 95 aa5.9□□□□□ -1.46
TM7SF3-201ENST00000343028 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
TM7SF3-201ENST00000343028 LCE1AQ5T7P2 110 aa5.85□□□□□ -1.47
TM7SF3-201ENST00000343028 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
TM7SF3-201ENST00000343028 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
TM7SF3-201ENST00000343028 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
TM7SF3-201ENST00000343028 SPRR2EP22531 72 aa5.78□□□□□ -1.48
TM7SF3-201ENST00000343028 SPRR2BP35325 72 aa5.78□□□□□ -1.48
TM7SF3-201ENST00000343028 SPRR2AP35326 72 aa5.78□□□□□ -1.48
TM7SF3-201ENST00000343028 KRTAP5-9P26371 169 aa5.76□□□□□ -1.49
TM7SF3-201ENST00000343028 KRTAP4-12Q9BQ66 201 aa5.71□□□□□ -1.5
TM7SF3-201ENST00000343028 OBSCNQ5VST9 7968 aa5.64□□□□□ -1.51
TM7SF3-201ENST00000343028 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
TM7SF3-201ENST00000343028 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
TM7SF3-201ENST00000343028 MT1AP04731 61 aa5.62□□□□□ -1.51
TM7SF3-201ENST00000343028 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
TM7SF3-201ENST00000343028 SPRR2DP22532 72 aa5.52□□□□□ -1.53
TM7SF3-201ENST00000343028 LCE3DQ9BYE3 92 aa5.41□□□□□ -1.54
TM7SF3-201ENST00000343028 LCE1DQ5T752 114 aa5.4□□□□□ -1.55
TM7SF3-201ENST00000343028 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
TM7SF3-201ENST00000343028 LCE3EQ5T5B0 92 aa5.29□□□□□ -1.56
TM7SF3-201ENST00000343028 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
TM7SF3-201ENST00000343028 PRM1P04553 51 aa5.25□□□□□ -1.57
TM7SF3-201ENST00000343028 KRTAP6-2Q3LI66 62 aa5.23□□□□□ -1.57
TM7SF3-201ENST00000343028 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
TM7SF3-201ENST00000343028 NEBP20929 6669 aa5.08□□□□□ -1.6
TM7SF3-201ENST00000343028 MT3P25713 68 aa5.07□□□□□ -1.6
TM7SF3-201ENST00000343028 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
TM7SF3-201ENST00000343028 MT4P47944 62 aa4.97□□□□□ -1.61
TM7SF3-201ENST00000343028 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
TM7SF3-201ENST00000343028 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
TM7SF3-201ENST00000343028 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
TM7SF3-201ENST00000343028 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
TM7SF3-201ENST00000343028 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
TM7SF3-201ENST00000343028 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
TM7SF3-201ENST00000343028 KRTAP5-2Q701N4 177 aa4.58□□□□□ -1.68
TM7SF3-201ENST00000343028 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
TM7SF3-201ENST00000343028 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
TM7SF3-201ENST00000343028 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
TM7SF3-201ENST00000343028 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
TM7SF3-201ENST00000343028 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
TM7SF3-201ENST00000343028 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
TM7SF3-201ENST00000343028 LCE1CQ5T751 118 aa3.9□□□□□ -1.78
TM7SF3-201ENST00000343028 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
TM7SF3-201ENST00000343028 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
TM7SF3-201ENST00000343028 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
TM7SF3-201ENST00000343028 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
TM7SF3-201ENST00000343028 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
TM7SF3-201ENST00000343028 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
TM7SF3-201ENST00000343028 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
TM7SF3-201ENST00000343028 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
TM7SF3-201ENST00000343028 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
TM7SF3-201ENST00000343028 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
TM7SF3-201ENST00000343028 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
TM7SF3-201ENST00000343028 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
TM7SF3-201ENST00000343028 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
TM7SF3-201ENST00000343028 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
TM7SF3-201ENST00000343028 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 65.8 ms