RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 PCLOQ9Y6V0 5065 aa4.62□□□□□ -1.67
PDPK1-202ENST00000342085 MUC17Q685J3 4493 aa4.6□□□□□ -1.67
PDPK1-202ENST00000342085 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
PDPK1-202ENST00000342085 SYNE2Q8WXH0 6885 aaKnown RBP4.56□□□□□ -1.68
PDPK1-202ENST00000342085 MT1LQ93083 61 aa4.51□□□□□ -1.69
PDPK1-202ENST00000342085 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
PDPK1-202ENST00000342085 KRTAP19-6Q3LI70 58 aa4.5□□□□□ -1.69
PDPK1-202ENST00000342085 PRM1P04553 51 aa4.47□□□□□ -1.69
PDPK1-202ENST00000342085 MT1EP04732 61 aa4.47□□□□□ -1.69
PDPK1-202ENST00000342085 ABCA13Q86UQ4 5058 aa4.44□□□□□ -1.7
PDPK1-202ENST00000342085 MT1MQ8N339 61 aa4.43□□□□□ -1.7
PDPK1-202ENST00000342085 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
PDPK1-202ENST00000342085 LCE1CQ5T751 118 aa4.4□□□□□ -1.7
PDPK1-202ENST00000342085 LCE1EQ5T753 118 aa4.4□□□□□ -1.7
PDPK1-202ENST00000342085 LCE1FQ5T754 118 aa4.4□□□□□ -1.7
PDPK1-202ENST00000342085 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.7
PDPK1-202ENST00000342085 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
PDPK1-202ENST00000342085 KRTAP19-2Q3LHN2 52 aa4.38□□□□□ -1.71
PDPK1-202ENST00000342085 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
PDPK1-202ENST00000342085 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
PDPK1-202ENST00000342085 HMCN2Q8NDA2 5059 aa4.31□□□□□ -1.72
PDPK1-202ENST00000342085 RNF213Q63HN8 5207 aa4.25□□□□□ -1.73
PDPK1-202ENST00000342085 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
PDPK1-202ENST00000342085 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
PDPK1-202ENST00000342085 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
PDPK1-202ENST00000342085 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
PDPK1-202ENST00000342085 KMT2DO14686 5537 aa4.15□□□□□ -1.74
PDPK1-202ENST00000342085 MT1AP04731 61 aa4.1□□□□□ -1.75
PDPK1-202ENST00000342085 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
PDPK1-202ENST00000342085 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
PDPK1-202ENST00000342085 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
PDPK1-202ENST00000342085 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
PDPK1-202ENST00000342085 KRTAP9-1A8MXZ3 250 aaPredicted RBP4□□□□□ -1.77
PDPK1-202ENST00000342085 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
PDPK1-202ENST00000342085 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
PDPK1-202ENST00000342085 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
PDPK1-202ENST00000342085 USH2AO75445 5202 aa3.9□□□□□ -1.79
PDPK1-202ENST00000342085 KRTAP9-4Q9BYQ2 154 aa3.83□□□□□ -1.8
PDPK1-202ENST00000342085 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
PDPK1-202ENST00000342085 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
PDPK1-202ENST00000342085 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
PDPK1-202ENST00000342085 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
PDPK1-202ENST00000342085 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
PDPK1-202ENST00000342085 FCGBPQ9Y6R7 5405 aaPredicted RBP3.76□□□□□ -1.81
PDPK1-202ENST00000342085 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
PDPK1-202ENST00000342085 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
PDPK1-202ENST00000342085 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
PDPK1-202ENST00000342085 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.87
PDPK1-202ENST00000342085 SSPOA2VEC9 5147 aa3.34□□□□□ -1.87
PDPK1-202ENST00000342085 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
PDPK1-202ENST00000342085 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
PDPK1-202ENST00000342085 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
PDPK1-202ENST00000342085 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
PDPK1-202ENST00000342085 NEBP20929 6669 aa3.16□□□□□ -1.9
PDPK1-202ENST00000342085 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
PDPK1-202ENST00000342085 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
PDPK1-202ENST00000342085 MDN1Q9NU22 5596 aa2.9□□□□□ -1.94
PDPK1-202ENST00000342085 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
PDPK1-202ENST00000342085 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
PDPK1-202ENST00000342085 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
PDPK1-202ENST00000342085 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
PDPK1-202ENST00000342085 KRTAP5-3Q6L8H2 238 aa2.62□□□□□ -1.99
PDPK1-202ENST00000342085 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
PDPK1-202ENST00000342085 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
PDPK1-202ENST00000342085 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
PDPK1-202ENST00000342085 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
PDPK1-202ENST00000342085 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
PDPK1-202ENST00000342085 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
PDPK1-202ENST00000342085 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
PDPK1-202ENST00000342085 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
PDPK1-202ENST00000342085 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
PDPK1-202ENST00000342085 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
PDPK1-202ENST00000342085 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
PDPK1-202ENST00000342085 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
PDPK1-202ENST00000342085 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
PDPK1-202ENST00000342085 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
PDPK1-202ENST00000342085 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms