RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 KRTAP2-3P0C7H8 128 aa6.8□□□□□ -1.32
SPG7-202ENST00000341316 KRTAP2-4Q9BYR9 128 aa6.8□□□□□ -1.32
SPG7-202ENST00000341316 KRTAP2-1Q9BYU5 128 aa6.8□□□□□ -1.32
SPG7-202ENST00000341316 KRTAP4-3Q9BYR4 195 aa6.71□□□□□ -1.34
SPG7-202ENST00000341316 MACF1Q9UPN3 7388 aaKnown RBP6.67□□□□□ -1.34
SPG7-202ENST00000341316 KRTAP19-3Q7Z4W3 81 aa6.65□□□□□ -1.35
SPG7-202ENST00000341316 MT1MQ8N339 61 aa6.62□□□□□ -1.35
SPG7-202ENST00000341316 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
SPG7-202ENST00000341316 MT1GP13640 62 aa6.59□□□□□ -1.35
SPG7-202ENST00000341316 SPRR2FQ96RM1 72 aa6.53□□□□□ -1.36
SPG7-202ENST00000341316 DSTQ03001 7570 aaKnown RBP6.53□□□□□ -1.36
SPG7-202ENST00000341316 SYNE2Q8WXH0 6885 aaKnown RBP6.5□□□□□ -1.37
SPG7-202ENST00000341316 LCE5AQ5TCM9 118 aa6.47□□□□□ -1.37
SPG7-202ENST00000341316 KRTAP9-2Q9BYQ4 174 aa6.47□□□□□ -1.37
SPG7-202ENST00000341316 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
SPG7-202ENST00000341316 MDN1Q9NU22 5596 aa6.39□□□□□ -1.39
SPG7-202ENST00000341316 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
SPG7-202ENST00000341316 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.43
SPG7-202ENST00000341316 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
SPG7-202ENST00000341316 SPRR2EP22531 72 aa6□□□□□ -1.45
SPG7-202ENST00000341316 SPRR2BP35325 72 aa6□□□□□ -1.45
SPG7-202ENST00000341316 SPRR2AP35326 72 aa6□□□□□ -1.45
SPG7-202ENST00000341316 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
SPG7-202ENST00000341316 KRTAP6-1Q3LI64 71 aa5.98□□□□□ -1.45
SPG7-202ENST00000341316 SYNE1Q8NF91 8797 aaKnown RBP5.97□□□□□ -1.45
SPG7-202ENST00000341316 MT1AP04731 61 aa5.9□□□□□ -1.46
SPG7-202ENST00000341316 KRTAP5-5Q701N2 237 aaPredicted RBP5.9□□□□□ -1.46
SPG7-202ENST00000341316 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
SPG7-202ENST00000341316 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
SPG7-202ENST00000341316 KRTAP9-6A0A140TA67 174 aa5.8□□□□□ -1.48
SPG7-202ENST00000341316 SPRR2DP22532 72 aa5.74□□□□□ -1.49
SPG7-202ENST00000341316 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
SPG7-202ENST00000341316 LCE3DQ9BYE3 92 aa5.6□□□□□ -1.51
SPG7-202ENST00000341316 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
SPG7-202ENST00000341316 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
SPG7-202ENST00000341316 NEBP20929 6669 aa5.46□□□□□ -1.54
SPG7-202ENST00000341316 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
SPG7-202ENST00000341316 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
SPG7-202ENST00000341316 OBSCNQ5VST9 7968 aa5.39□□□□□ -1.55
SPG7-202ENST00000341316 PRM1P04553 51 aa5.38□□□□□ -1.55
SPG7-202ENST00000341316 MT3P25713 68 aa5.3□□□□□ -1.56
SPG7-202ENST00000341316 KRTAP5-4Q6L8H1 288 aa5.29□□□□□ -1.56
SPG7-202ENST00000341316 KRTAP4-6Q9BYQ5 205 aa5.16□□□□□ -1.58
SPG7-202ENST00000341316 MT4P47944 62 aa5.11□□□□□ -1.59
SPG7-202ENST00000341316 HMCN1Q96RW7 5635 aa4.99□□□□□ -1.61
SPG7-202ENST00000341316 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
SPG7-202ENST00000341316 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
SPG7-202ENST00000341316 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
SPG7-202ENST00000341316 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
SPG7-202ENST00000341316 KRTAP2-2Q9BYT5 123 aa4.84□□□□□ -1.63
SPG7-202ENST00000341316 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
SPG7-202ENST00000341316 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
SPG7-202ENST00000341316 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
SPG7-202ENST00000341316 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
SPG7-202ENST00000341316 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
SPG7-202ENST00000341316 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
SPG7-202ENST00000341316 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
SPG7-202ENST00000341316 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
SPG7-202ENST00000341316 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
SPG7-202ENST00000341316 LCE1CQ5T751 118 aa4.15□□□□□ -1.74
SPG7-202ENST00000341316 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
SPG7-202ENST00000341316 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
SPG7-202ENST00000341316 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
SPG7-202ENST00000341316 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
SPG7-202ENST00000341316 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
SPG7-202ENST00000341316 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
SPG7-202ENST00000341316 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
SPG7-202ENST00000341316 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.82
SPG7-202ENST00000341316 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.84
SPG7-202ENST00000341316 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
SPG7-202ENST00000341316 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
SPG7-202ENST00000341316 KRTAP21-1Q3LI58 79 aa3.38□□□□□ -1.87
SPG7-202ENST00000341316 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
SPG7-202ENST00000341316 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SPG7-202ENST00000341316 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
SPG7-202ENST00000341316 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
SPG7-202ENST00000341316 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms