RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 SYNE2Q8WXH0 6885 aaKnown RBP5.98□□□□□ -1.45
CDK11B-201ENST00000340677 LCE1EQ5T753 118 aa5.9□□□□□ -1.46
CDK11B-201ENST00000340677 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.47
CDK11B-201ENST00000340677 NEBP20929 6669 aa5.85□□□□□ -1.47
CDK11B-201ENST00000340677 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
CDK11B-201ENST00000340677 LCE3CQ5T5A8 94 aa5.78□□□□□ -1.48
CDK11B-201ENST00000340677 KRTAP12-4P60329 112 aa5.77□□□□□ -1.49
CDK11B-201ENST00000340677 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
CDK11B-201ENST00000340677 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
CDK11B-201ENST00000340677 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.5
CDK11B-201ENST00000340677 KRTAP5-9P26371 169 aa5.7□□□□□ -1.5
CDK11B-201ENST00000340677 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
CDK11B-201ENST00000340677 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
CDK11B-201ENST00000340677 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
CDK11B-201ENST00000340677 KMT2DO14686 5537 aa5.59□□□□□ -1.51
CDK11B-201ENST00000340677 MUC12Q9UKN1 5478 aa5.56□□□□□ -1.52
CDK11B-201ENST00000340677 MT1EP04732 61 aa5.56□□□□□ -1.52
CDK11B-201ENST00000340677 LCE1FQ5T754 118 aa5.56□□□□□ -1.52
CDK11B-201ENST00000340677 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
CDK11B-201ENST00000340677 MT1LQ93083 61 aa5.46□□□□□ -1.54
CDK11B-201ENST00000340677 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
CDK11B-201ENST00000340677 SPRR2EP22531 72 aa5.37□□□□□ -1.55
CDK11B-201ENST00000340677 SPRR2BP35325 72 aa5.37□□□□□ -1.55
CDK11B-201ENST00000340677 SPRR2AP35326 72 aa5.37□□□□□ -1.55
CDK11B-201ENST00000340677 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
CDK11B-201ENST00000340677 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
CDK11B-201ENST00000340677 MDN1Q9NU22 5596 aa5.34□□□□□ -1.55
CDK11B-201ENST00000340677 PRM1P04553 51 aa5.32□□□□□ -1.56
CDK11B-201ENST00000340677 MT1GP13640 62 aa5.32□□□□□ -1.56
CDK11B-201ENST00000340677 MT1MQ8N339 61 aa5.23□□□□□ -1.57
CDK11B-201ENST00000340677 SPRR2DP22532 72 aa5.22□□□□□ -1.57
CDK11B-201ENST00000340677 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
CDK11B-201ENST00000340677 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
CDK11B-201ENST00000340677 SYNE1Q8NF91 8797 aaKnown RBP5.06□□□□□ -1.6
CDK11B-201ENST00000340677 KRTAP5-5Q701N2 237 aaPredicted RBP5.05□□□□□ -1.6
CDK11B-201ENST00000340677 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
CDK11B-201ENST00000340677 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
CDK11B-201ENST00000340677 LCE3EQ5T5B0 92 aa4.85□□□□□ -1.63
CDK11B-201ENST00000340677 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
CDK11B-201ENST00000340677 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
CDK11B-201ENST00000340677 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
CDK11B-201ENST00000340677 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
CDK11B-201ENST00000340677 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
CDK11B-201ENST00000340677 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
CDK11B-201ENST00000340677 MT1AP04731 61 aa4.67□□□□□ -1.66
CDK11B-201ENST00000340677 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
CDK11B-201ENST00000340677 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
CDK11B-201ENST00000340677 KRTAP5-7Q6L8G8 165 aa4.56□□□□□ -1.68
CDK11B-201ENST00000340677 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
CDK11B-201ENST00000340677 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
CDK11B-201ENST00000340677 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
CDK11B-201ENST00000340677 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
CDK11B-201ENST00000340677 MT4P47944 62 aa4.52□□□□□ -1.69
CDK11B-201ENST00000340677 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
CDK11B-201ENST00000340677 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
CDK11B-201ENST00000340677 KRTAP4-6Q9BYQ5 205 aa4.35□□□□□ -1.71
CDK11B-201ENST00000340677 MT3P25713 68 aa4.3□□□□□ -1.72
CDK11B-201ENST00000340677 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
CDK11B-201ENST00000340677 MUC19Q7Z5P9 8384 aa4.13□□□□□ -1.75
CDK11B-201ENST00000340677 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
CDK11B-201ENST00000340677 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
CDK11B-201ENST00000340677 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
CDK11B-201ENST00000340677 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
CDK11B-201ENST00000340677 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
CDK11B-201ENST00000340677 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
CDK11B-201ENST00000340677 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
CDK11B-201ENST00000340677 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
CDK11B-201ENST00000340677 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
CDK11B-201ENST00000340677 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
CDK11B-201ENST00000340677 KRTAP21-1Q3LI58 79 aa3.5□□□□□ -1.85
CDK11B-201ENST00000340677 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
CDK11B-201ENST00000340677 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
CDK11B-201ENST00000340677 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
CDK11B-201ENST00000340677 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
CDK11B-201ENST00000340677 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
CDK11B-201ENST00000340677 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
CDK11B-201ENST00000340677 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 264.9 ms