RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 UQCR10Q9UDW1 63 aa2.57□□□□□ -2
ATXN3-201ENST00000340660 LOC105371267A0A1B0GV96 52 aa2.54□□□□□ -2
ATXN3-201ENST00000340660 SCGB1C2P0DMR2 95 aa2.53□□□□□ -2
ATXN3-201ENST00000340660 TNP1P09430 55 aa2.52□□□□□ -2.01
ATXN3-201ENST00000340660 KRTAP25-1Q3LHN0 102 aa2.5□□□□□ -2.01
ATXN3-201ENST00000340660 SMIM6P0DI80 62 aa2.48□□□□□ -2.01
ATXN3-201ENST00000340660 M0R143 59 aa2.47□□□□□ -2.01
ATXN3-201ENST00000340660 TAX1BP3O14907 124 aa2.46□□□□□ -2.02
ATXN3-201ENST00000340660 ATXN8Q156A1 80 aa2.46□□□□□ -2.02
ATXN3-201ENST00000340660 SPINT4Q6UDR6 99 aa2.46□□□□□ -2.02
ATXN3-201ENST00000340660 TSTD3H0UI37 97 aa2.44□□□□□ -2.02
ATXN3-201ENST00000340660 SPCS1Q9Y6A9 102 aa2.43□□□□□ -2.02
ATXN3-201ENST00000340660 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
ATXN3-201ENST00000340660 H0Y9P7 68 aa2.4□□□□□ -2.03
ATXN3-201ENST00000340660 H3BT86 120 aa2.38□□□□□ -2.03
ATXN3-201ENST00000340660 KRTAP12-1P59990 96 aa2.38□□□□□ -2.03
ATXN3-201ENST00000340660 DMAC1Q96GE9 116 aa2.38□□□□□ -2.03
ATXN3-201ENST00000340660 PCP4L1A6NKN8 68 aa2.37□□□□□ -2.03
ATXN3-201ENST00000340660 COL5A1-AS1Q5SY13 56 aa2.37□□□□□ -2.03
ATXN3-201ENST00000340660 ATOX1O00244 68 aa2.36□□□□□ -2.03
ATXN3-201ENST00000340660 LINC00208Q96KT6 92 aa2.35□□□□□ -2.03
ATXN3-201ENST00000340660 TRAV7A0A075B6U4 112 aa2.33□□□□□ -2.04
ATXN3-201ENST00000340660 ETDBQ3ZM63 59 aa2.32□□□□□ -2.04
ATXN3-201ENST00000340660 F8W1H4 67 aa2.31□□□□□ -2.04
ATXN3-201ENST00000340660 GTF2H5Q6ZYL4 71 aa2.29□□□□□ -2.04
ATXN3-201ENST00000340660 UBL5Q9BZL1 73 aa2.29□□□□□ -2.04
ATXN3-201ENST00000340660 UQCRQO14949 82 aa2.26□□□□□ -2.05
ATXN3-201ENST00000340660 A0A1B0GV90 55 aa2.24□□□□□ -2.05
ATXN3-201ENST00000340660 SEC61GP60059 68 aa2.22□□□□□ -2.05
ATXN3-201ENST00000340660 SPATA8Q6RVD6 105 aa2.21□□□□□ -2.06
ATXN3-201ENST00000340660 HIST1H4AP62805 103 aaKnown RBP2.2□□□□□ -2.06
ATXN3-201ENST00000340660 FAM240AA0A1B0GVK7 77 aa2.19□□□□□ -2.06
ATXN3-201ENST00000340660 SPTSSBQ8NFR3 76 aa2.19□□□□□ -2.06
ATXN3-201ENST00000340660 LINC00643Q86TS7 51 aa2.18□□□□□ -2.06
ATXN3-201ENST00000340660 ATP5EP2Q5VTU8 51 aa2.15□□□□□ -2.07
ATXN3-201ENST00000340660 J3QR89 54 aa2.09□□□□□ -2.07
ATXN3-201ENST00000340660 MP68P56378 58 aa2.09□□□□□ -2.07
ATXN3-201ENST00000340660 SCGB1A1P11684 91 aa2.08□□□□□ -2.08
ATXN3-201ENST00000340660 H3BPC8 53 aa2.06□□□□□ -2.08
ATXN3-201ENST00000340660 K7ERU9 68 aa2.04□□□□□ -2.08
ATXN3-201ENST00000340660 ACYP2P14621 99 aa2.03□□□□□ -2.08
ATXN3-201ENST00000340660 SNURFQ9Y675 71 aa2.02□□□□□ -2.09
ATXN3-201ENST00000340660 SMIM20Q8N5G0 67 aa1.99□□□□□ -2.09
ATXN3-201ENST00000340660 CHKB-CPT1BH3BT56 60 aa1.97□□□□□ -2.09
ATXN3-201ENST00000340660 SERP2Q8N6R1 65 aa1.97□□□□□ -2.09
ATXN3-201ENST00000340660 SPANXA2-OT1Q8N9U9 137 aa1.94□□□□□ -2.1
ATXN3-201ENST00000340660 COX7CP15954 63 aa1.92□□□□□ -2.1
ATXN3-201ENST00000340660 COA5Q86WW8 74 aa1.91□□□□□ -2.1
ATXN3-201ENST00000340660 SMIM26A0A096LP01 95 aa1.9□□□□□ -2.11
ATXN3-201ENST00000340660 H7BZZ5 65 aa1.9□□□□□ -2.11
ATXN3-201ENST00000340660 ANAPC13Q9BS18 74 aa1.89□□□□□ -2.11
ATXN3-201ENST00000340660 A0A1B0GU33 70 aa1.87□□□□□ -2.11
ATXN3-201ENST00000340660 CCDC179H3BU77 68 aa1.87□□□□□ -2.11
ATXN3-201ENST00000340660 SERP1Q9Y6X1 66 aa1.84□□□□□ -2.11
ATXN3-201ENST00000340660 V9GYY9 64 aa1.84□□□□□ -2.11
ATXN3-201ENST00000340660 A0A1B0GU69 56 aa1.79□□□□□ -2.12
ATXN3-201ENST00000340660 RPS28P62857 69 aaKnown RBP1.79□□□□□ -2.12
ATXN3-201ENST00000340660 PRO0628Q9UI54 55 aa1.79□□□□□ -2.12
ATXN3-201ENST00000340660 PSPHP1O15172 72 aa1.77□□□□□ -2.13
ATXN3-201ENST00000340660 LINC01558Q9Y6Z2 57 aa1.76□□□□□ -2.13
ATXN3-201ENST00000340660 TMEM258P61165 79 aa1.75□□□□□ -2.13
ATXN3-201ENST00000340660 LUZP6Q538Z0 58 aa1.75□□□□□ -2.13
ATXN3-201ENST00000340660 ATP5EP56381 51 aaPredicted RBP1.72□□□□□ -2.13
ATXN3-201ENST00000340660 PMAIP1Q13794 54 aa1.71□□□□□ -2.14
ATXN3-201ENST00000340660 PRR15LQ9BU68 103 aa1.7□□□□□ -2.14
ATXN3-201ENST00000340660 UQCR11O14957 56 aa1.68□□□□□ -2.14
ATXN3-201ENST00000340660 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
ATXN3-201ENST00000340660 MIR22HGQ0VDD5 57 aa1.66□□□□□ -2.14
ATXN3-201ENST00000340660 BRK1Q8WUW1 75 aa1.66□□□□□ -2.14
ATXN3-201ENST00000340660 Q1T7F1 81 aa1.65□□□□□ -2.15
ATXN3-201ENST00000340660 K7ERS5 55 aa1.62□□□□□ -2.15
ATXN3-201ENST00000340660 KTN1-AS1Q86SY8 53 aa1.62□□□□□ -2.15
ATXN3-201ENST00000340660 A6NED7 52 aa1.59□□□□□ -2.15
ATXN3-201ENST00000340660 CDC42SE1Q9NRR8 79 aa1.53□□□□□ -2.16
ATXN3-201ENST00000340660 ROMO1P60602 79 aa1.52□□□□□ -2.17
ATXN3-201ENST00000340660 INE1O15225 51 aa1.16□□□□□ -2.22
ATXN3-201ENST00000340660 PRM1P04553 51 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms