RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 ANK3Q12955 4377 aaKnown RBP0.96□□□□□ -2.26
CCDC30-201ENST00000340612 Q5VSD8 79 aa0.96□□□□□ -2.26
CCDC30-201ENST00000340612 DNAH6Q9C0G6 4158 aa0.95□□□□□ -2.26
CCDC30-201ENST00000340612 STARD9Q9P2P6 4700 aa0.95□□□□□ -2.26
CCDC30-201ENST00000340612 SPART-AS1P0CW21 52 aa0.95□□□□□ -2.26
CCDC30-201ENST00000340612 DEFB124Q8NES8 71 aa0.95□□□□□ -2.26
CCDC30-201ENST00000340612 H3BNG1 76 aa0.94□□□□□ -2.26
CCDC30-201ENST00000340612 M0QZ58 72 aa0.94□□□□□ -2.26
CCDC30-201ENST00000340612 HUWE1Q7Z6Z7 4374 aaKnown RBP0.94□□□□□ -2.26
CCDC30-201ENST00000340612 DEFB135Q30KP9 77 aa0.94□□□□□ -2.26
CCDC30-201ENST00000340612 DNAH2Q9P225 4427 aa0.93□□□□□ -2.26
CCDC30-201ENST00000340612 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
CCDC30-201ENST00000340612 PRKDCP78527 4128 aaKnown RBP0.91□□□□□ -2.26
CCDC30-201ENST00000340612 DSTQ03001 7570 aaKnown RBP0.91□□□□□ -2.26
CCDC30-201ENST00000340612 DNAH9Q9NYC9 4486 aa0.89□□□□□ -2.27
CCDC30-201ENST00000340612 APOBP04114 4563 aaKnown RBP0.89□□□□□ -2.27
CCDC30-201ENST00000340612 SACSQ9NZJ4 4579 aa0.89□□□□□ -2.27
CCDC30-201ENST00000340612 PKHD1L1Q86WI1 4243 aa0.88□□□□□ -2.27
CCDC30-201ENST00000340612 KRTAP12-3P60328 96 aa0.88□□□□□ -2.27
CCDC30-201ENST00000340612 CMYA5Q8N3K9 4069 aa0.87□□□□□ -2.27
CCDC30-201ENST00000340612 PKHD1P08F94 4074 aa0.86□□□□□ -2.27
CCDC30-201ENST00000340612 LRP1Q07954 4544 aaKnown RBP0.85□□□□□ -2.27
CCDC30-201ENST00000340612 C9orf92A6NGG3 77 aa0.85□□□□□ -2.27
CCDC30-201ENST00000340612 PLECQ15149 4684 aaKnown RBP0.84□□□□□ -2.27
CCDC30-201ENST00000340612 TNP1P09430 55 aa0.84□□□□□ -2.27
CCDC30-201ENST00000340612 LRP2P98164 4655 aa0.84□□□□□ -2.28
CCDC30-201ENST00000340612 SMR3AQ99954 134 aa0.82□□□□□ -2.28
CCDC30-201ENST00000340612 VPS13BQ7Z7G8 4022 aa0.82□□□□□ -2.28
CCDC30-201ENST00000340612 KRTAP12-4P60329 112 aa0.82□□□□□ -2.28
CCDC30-201ENST00000340612 RPS29P62273 56 aaKnown RBP0.82□□□□□ -2.28
CCDC30-201ENST00000340612 PKD1P98161 4303 aa0.81□□□□□ -2.28
CCDC30-201ENST00000340612 DYNC1H1Q14204 4646 aaKnown RBP0.81□□□□□ -2.28
CCDC30-201ENST00000340612 KRTAP19-6Q3LI70 58 aa0.81□□□□□ -2.28
CCDC30-201ENST00000340612 FAT2Q9NYQ8 4349 aa0.8□□□□□ -2.28
CCDC30-201ENST00000340612 FAT1Q14517 4588 aa0.8□□□□□ -2.28
CCDC30-201ENST00000340612 KRTAP4-1Q9BYQ7 146 aa0.79□□□□□ -2.28
CCDC30-201ENST00000340612 KRTAP8-1Q8IUC2 63 aa0.76□□□□□ -2.29
CCDC30-201ENST00000340612 SPRR2DP22532 72 aa0.75□□□□□ -2.29
CCDC30-201ENST00000340612 KRTAP10-4P60372 401 aaPredicted RBP0.75□□□□□ -2.29
CCDC30-201ENST00000340612 SPRR2EP22531 72 aa0.74□□□□□ -2.29
CCDC30-201ENST00000340612 SPRR2BP35325 72 aa0.74□□□□□ -2.29
CCDC30-201ENST00000340612 SPRR2AP35326 72 aa0.74□□□□□ -2.29
CCDC30-201ENST00000340612 LPAP08519 4548 aa0.74□□□□□ -2.29
CCDC30-201ENST00000340612 FLGP20930 4061 aaPredicted RBP0.74□□□□□ -2.29
CCDC30-201ENST00000340612 M0R2T5 61 aa0.74□□□□□ -2.29
CCDC30-201ENST00000340612 MUC12Q9UKN1 5478 aa0.73□□□□□ -2.29
CCDC30-201ENST00000340612 TNXBP22105 4242 aa0.73□□□□□ -2.29
CCDC30-201ENST00000340612 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
CCDC30-201ENST00000340612 DNAH5Q8TE73 4624 aa0.72□□□□□ -2.29
CCDC30-201ENST00000340612 SMR3BP02814 79 aaPredicted RBP0.71□□□□□ -2.3
CCDC30-201ENST00000340612 PRM1P04553 51 aa0.69□□□□□ -2.3
CCDC30-201ENST00000340612 MUC17Q685J3 4493 aa0.69□□□□□ -2.3
CCDC30-201ENST00000340612 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
CCDC30-201ENST00000340612 SYNE1Q8NF91 8797 aaKnown RBP0.67□□□□□ -2.3
CCDC30-201ENST00000340612 KRTAP19-5Q3LI72 72 aa0.66□□□□□ -2.3
CCDC30-201ENST00000340612 SPRR2GQ9BYE4 73 aa0.61□□□□□ -2.31
CCDC30-201ENST00000340612 MT4P47944 62 aa0.6□□□□□ -2.31
CCDC30-201ENST00000340612 KRTAP19-2Q3LHN2 52 aa0.58□□□□□ -2.32
CCDC30-201ENST00000340612 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
CCDC30-201ENST00000340612 MT1XP80297 61 aa0.58□□□□□ -2.32
CCDC30-201ENST00000340612 MT1AP04731 61 aa0.57□□□□□ -2.32
CCDC30-201ENST00000340612 MT1HL1P0DM35 61 aa0.54□□□□□ -2.32
CCDC30-201ENST00000340612 KRTAP19-3Q7Z4W3 81 aa0.54□□□□□ -2.32
CCDC30-201ENST00000340612 MT1EP04732 61 aa0.52□□□□□ -2.33
CCDC30-201ENST00000340612 KRTAP19-8Q3LI54 63 aa0.52□□□□□ -2.33
CCDC30-201ENST00000340612 MT1LQ93083 61 aa0.52□□□□□ -2.33
CCDC30-201ENST00000340612 KRTAP19-7Q3SYF9 63 aa0.51□□□□□ -2.33
CCDC30-201ENST00000340612 SPRR2FQ96RM1 72 aa0.51□□□□□ -2.33
CCDC30-201ENST00000340612 MT1BP07438 61 aa0.51□□□□□ -2.33
CCDC30-201ENST00000340612 MT1GP13640 62 aa0.51□□□□□ -2.33
CCDC30-201ENST00000340612 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
CCDC30-201ENST00000340612 KRTAP20-2Q3LI61 65 aa0.48□□□□□ -2.33
CCDC30-201ENST00000340612 MT1FP04733 61 aa0.47□□□□□ -2.33
CCDC30-201ENST00000340612 MT1HP80294 61 aa0.46□□□□□ -2.34
CCDC30-201ENST00000340612 MT2AP02795 61 aa0.45□□□□□ -2.34
CCDC30-201ENST00000340612 KRTAP6-1Q3LI64 71 aa0.44□□□□□ -2.34
CCDC30-201ENST00000340612 MT1MQ8N339 61 aa0.42□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms