RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
UBC-201ENST00000339647 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
UBC-201ENST00000339647 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
UBC-201ENST00000339647 KRTAP19-6Q3LI70 58 aa6.52□□□□□ -1.37
UBC-201ENST00000339647 KRTAP12-4P60329 112 aa6.47□□□□□ -1.37
UBC-201ENST00000339647 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.38
UBC-201ENST00000339647 MT1GP13640 62 aa6.45□□□□□ -1.38
UBC-201ENST00000339647 SYNE2Q8WXH0 6885 aaKnown RBP6.41□□□□□ -1.38
UBC-201ENST00000339647 DSTQ03001 7570 aaKnown RBP6.4□□□□□ -1.38
UBC-201ENST00000339647 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
UBC-201ENST00000339647 LCE2DQ5TA82 110 aaPredicted RBP6.34□□□□□ -1.39
UBC-201ENST00000339647 KRTAP9-2Q9BYQ4 174 aa6.24□□□□□ -1.41
UBC-201ENST00000339647 MT1MQ8N339 61 aa6.23□□□□□ -1.41
UBC-201ENST00000339647 MDN1Q9NU22 5596 aa6.2□□□□□ -1.42
UBC-201ENST00000339647 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
UBC-201ENST00000339647 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
UBC-201ENST00000339647 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
UBC-201ENST00000339647 SPRR2FQ96RM1 72 aa6.09□□□□□ -1.44
UBC-201ENST00000339647 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
UBC-201ENST00000339647 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
UBC-201ENST00000339647 MT1AP04731 61 aa5.86□□□□□ -1.47
UBC-201ENST00000339647 KRTAP9-7A8MTY7 169 aa5.85□□□□□ -1.47
UBC-201ENST00000339647 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
UBC-201ENST00000339647 LCE3DQ9BYE3 92 aa5.81□□□□□ -1.48
UBC-201ENST00000339647 KRTAP5-5Q701N2 237 aaPredicted RBP5.8□□□□□ -1.48
UBC-201ENST00000339647 PRM1P04553 51 aa5.8□□□□□ -1.48
UBC-201ENST00000339647 LCE3EQ5T5B0 92 aa5.77□□□□□ -1.49
UBC-201ENST00000339647 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
UBC-201ENST00000339647 SPRR2EP22531 72 aa5.61□□□□□ -1.51
UBC-201ENST00000339647 KRTAP5-9P26371 169 aa5.61□□□□□ -1.51
UBC-201ENST00000339647 SPRR2BP35325 72 aa5.61□□□□□ -1.51
UBC-201ENST00000339647 SPRR2AP35326 72 aa5.61□□□□□ -1.51
UBC-201ENST00000339647 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
UBC-201ENST00000339647 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.55□□□□□ -1.52
UBC-201ENST00000339647 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
UBC-201ENST00000339647 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
UBC-201ENST00000339647 SPRR2DP22532 72 aa5.35□□□□□ -1.55
UBC-201ENST00000339647 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
UBC-201ENST00000339647 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
UBC-201ENST00000339647 NEBP20929 6669 aa5.2□□□□□ -1.58
UBC-201ENST00000339647 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
UBC-201ENST00000339647 MT3P25713 68 aa5.03□□□□□ -1.6
UBC-201ENST00000339647 MT4P47944 62 aa4.88□□□□□ -1.63
UBC-201ENST00000339647 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
UBC-201ENST00000339647 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
UBC-201ENST00000339647 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
UBC-201ENST00000339647 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
UBC-201ENST00000339647 LCE1DQ5T752 114 aa4.59□□□□□ -1.68
UBC-201ENST00000339647 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
UBC-201ENST00000339647 KRTAP20-1Q3LI63 56 aa4.48□□□□□ -1.69
UBC-201ENST00000339647 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
UBC-201ENST00000339647 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
UBC-201ENST00000339647 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
UBC-201ENST00000339647 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
UBC-201ENST00000339647 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
UBC-201ENST00000339647 KRTAP5-10Q6L8G5 202 aa4.19□□□□□ -1.74
UBC-201ENST00000339647 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
UBC-201ENST00000339647 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
UBC-201ENST00000339647 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
UBC-201ENST00000339647 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
UBC-201ENST00000339647 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
UBC-201ENST00000339647 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
UBC-201ENST00000339647 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
UBC-201ENST00000339647 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
UBC-201ENST00000339647 KRTAP21-1Q3LI58 79 aa3.64□□□□□ -1.83
UBC-201ENST00000339647 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
UBC-201ENST00000339647 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
UBC-201ENST00000339647 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
UBC-201ENST00000339647 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
UBC-201ENST00000339647 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
UBC-201ENST00000339647 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
UBC-201ENST00000339647 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
UBC-201ENST00000339647 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
UBC-201ENST00000339647 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
UBC-201ENST00000339647 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
UBC-201ENST00000339647 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
UBC-201ENST00000339647 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 75.9 ms