RNA–Protein interactions for RNA: ENST00000338932.7

SPTBN4-201, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-201ENST00000338932 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
SPTBN4-201ENST00000338932 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
SPTBN4-201ENST00000338932 KRTAP17-1Q9BYP8 105 aa5.32□□□□□ -1.56
SPTBN4-201ENST00000338932 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
SPTBN4-201ENST00000338932 LPAP08519 4548 aa5.27□□□□□ -1.57
SPTBN4-201ENST00000338932 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
SPTBN4-201ENST00000338932 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
SPTBN4-201ENST00000338932 KRTAP9-6A0A140TA67 174 aa5.13□□□□□ -1.59
SPTBN4-201ENST00000338932 KMT2CQ8NEZ4 4911 aaKnown RBP5.12□□□□□ -1.59
SPTBN4-201ENST00000338932 KRTAP20-1Q3LI63 56 aa5.09□□□□□ -1.59
SPTBN4-201ENST00000338932 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
SPTBN4-201ENST00000338932 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
SPTBN4-201ENST00000338932 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
SPTBN4-201ENST00000338932 BIRC6Q9NR09 4857 aa4.97□□□□□ -1.61
SPTBN4-201ENST00000338932 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.62
SPTBN4-201ENST00000338932 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
SPTBN4-201ENST00000338932 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
SPTBN4-201ENST00000338932 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
SPTBN4-201ENST00000338932 LCE1FQ5T754 118 aa4.94□□□□□ -1.62
SPTBN4-201ENST00000338932 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
SPTBN4-201ENST00000338932 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
SPTBN4-201ENST00000338932 RYR2Q92736 4967 aa4.87□□□□□ -1.63
SPTBN4-201ENST00000338932 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
SPTBN4-201ENST00000338932 PCLOQ9Y6V0 5065 aa4.86□□□□□ -1.63
SPTBN4-201ENST00000338932 HERC2O95714 4834 aa4.82□□□□□ -1.64
SPTBN4-201ENST00000338932 KRTAP9-9Q9BYP9 154 aa4.67□□□□□ -1.66
SPTBN4-201ENST00000338932 HERC1Q15751 4861 aa4.61□□□□□ -1.67
SPTBN4-201ENST00000338932 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
SPTBN4-201ENST00000338932 HMCN2Q8NDA2 5059 aa4.52□□□□□ -1.69
SPTBN4-201ENST00000338932 HYDINQ4G0P3 5121 aa4.47□□□□□ -1.69
SPTBN4-201ENST00000338932 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
SPTBN4-201ENST00000338932 KIAA1109Q2LD37 5005 aa4.33□□□□□ -1.72
SPTBN4-201ENST00000338932 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
SPTBN4-201ENST00000338932 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
SPTBN4-201ENST00000338932 FSIP2Q5CZC0 6907 aa4.11□□□□□ -1.75
SPTBN4-201ENST00000338932 EPPK1P58107 5090 aaKnown RBP4.04□□□□□ -1.76
SPTBN4-201ENST00000338932 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
SPTBN4-201ENST00000338932 RNF213Q63HN8 5207 aa3.96□□□□□ -1.78
SPTBN4-201ENST00000338932 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
SPTBN4-201ENST00000338932 MUC2Q02817 5179 aa3.85□□□□□ -1.79
SPTBN4-201ENST00000338932 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
SPTBN4-201ENST00000338932 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
SPTBN4-201ENST00000338932 UBR4Q5T4S7 5183 aa3.75□□□□□ -1.81
SPTBN4-201ENST00000338932 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
SPTBN4-201ENST00000338932 FAT4Q6V0I7 4981 aa3.7□□□□□ -1.82
SPTBN4-201ENST00000338932 ABCA13Q86UQ4 5058 aa3.62□□□□□ -1.83
SPTBN4-201ENST00000338932 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
SPTBN4-201ENST00000338932 NEBP20929 6669 aa3.55□□□□□ -1.84
SPTBN4-201ENST00000338932 KMT2DO14686 5537 aa3.47□□□□□ -1.85
SPTBN4-201ENST00000338932 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
SPTBN4-201ENST00000338932 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
SPTBN4-201ENST00000338932 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
SPTBN4-201ENST00000338932 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.86
SPTBN4-201ENST00000338932 DSTQ03001 7570 aaKnown RBP3.4□□□□□ -1.87
SPTBN4-201ENST00000338932 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
SPTBN4-201ENST00000338932 FCGBPQ9Y6R7 5405 aaPredicted RBP3.34□□□□□ -1.88
SPTBN4-201ENST00000338932 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
SPTBN4-201ENST00000338932 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
SPTBN4-201ENST00000338932 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
SPTBN4-201ENST00000338932 USH2AO75445 5202 aa3.08□□□□□ -1.92
SPTBN4-201ENST00000338932 SSPOA2VEC9 5147 aa2.98□□□□□ -1.93
SPTBN4-201ENST00000338932 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
SPTBN4-201ENST00000338932 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
SPTBN4-201ENST00000338932 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
SPTBN4-201ENST00000338932 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.94
SPTBN4-201ENST00000338932 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
SPTBN4-201ENST00000338932 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
SPTBN4-201ENST00000338932 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
SPTBN4-201ENST00000338932 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
SPTBN4-201ENST00000338932 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
SPTBN4-201ENST00000338932 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
SPTBN4-201ENST00000338932 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
SPTBN4-201ENST00000338932 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
SPTBN4-201ENST00000338932 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
SPTBN4-201ENST00000338932 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
SPTBN4-201ENST00000338932 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
SPTBN4-201ENST00000338932 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 56.2 ms