RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 KRTAP2-1Q9BYU5 128 aa4.73□□□□□ -1.65
SATB1-201ENST00000338745 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
SATB1-201ENST00000338745 RYR2Q92736 4967 aa4.69□□□□□ -1.66
SATB1-201ENST00000338745 KMT2CQ8NEZ4 4911 aaKnown RBP4.68□□□□□ -1.66
SATB1-201ENST00000338745 KRTAP9-2Q9BYQ4 174 aa4.67□□□□□ -1.66
SATB1-201ENST00000338745 MT1AP04731 61 aa4.66□□□□□ -1.66
SATB1-201ENST00000338745 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.67
SATB1-201ENST00000338745 HERC2O95714 4834 aa4.62□□□□□ -1.67
SATB1-201ENST00000338745 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
SATB1-201ENST00000338745 HERC1Q15751 4861 aa4.6□□□□□ -1.67
SATB1-201ENST00000338745 KIAA1109Q2LD37 5005 aa4.53□□□□□ -1.68
SATB1-201ENST00000338745 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
SATB1-201ENST00000338745 SYNE2Q8WXH0 6885 aaKnown RBP4.5□□□□□ -1.69
SATB1-201ENST00000338745 KRTAP9-7A8MTY7 169 aa4.44□□□□□ -1.7
SATB1-201ENST00000338745 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
SATB1-201ENST00000338745 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
SATB1-201ENST00000338745 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
SATB1-201ENST00000338745 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
SATB1-201ENST00000338745 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
SATB1-201ENST00000338745 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
SATB1-201ENST00000338745 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
SATB1-201ENST00000338745 HMCN2Q8NDA2 5059 aa4.34□□□□□ -1.71
SATB1-201ENST00000338745 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
SATB1-201ENST00000338745 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
SATB1-201ENST00000338745 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
SATB1-201ENST00000338745 BIRC6Q9NR09 4857 aa4.13□□□□□ -1.75
SATB1-201ENST00000338745 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
SATB1-201ENST00000338745 PCLOQ9Y6V0 5065 aa4.07□□□□□ -1.76
SATB1-201ENST00000338745 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
SATB1-201ENST00000338745 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.96□□□□□ -1.78
SATB1-201ENST00000338745 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
SATB1-201ENST00000338745 ABCA13Q86UQ4 5058 aa3.86□□□□□ -1.79
SATB1-201ENST00000338745 FAT4Q6V0I7 4981 aa3.84□□□□□ -1.79
SATB1-201ENST00000338745 EPPK1P58107 5090 aaKnown RBP3.82□□□□□ -1.8
SATB1-201ENST00000338745 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
SATB1-201ENST00000338745 FSIP2Q5CZC0 6907 aa3.68□□□□□ -1.82
SATB1-201ENST00000338745 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
SATB1-201ENST00000338745 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
SATB1-201ENST00000338745 UBR4Q5T4S7 5183 aa3.63□□□□□ -1.83
SATB1-201ENST00000338745 KMT2DO14686 5537 aa3.62□□□□□ -1.83
SATB1-201ENST00000338745 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
SATB1-201ENST00000338745 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
SATB1-201ENST00000338745 MUC2Q02817 5179 aa3.57□□□□□ -1.84
SATB1-201ENST00000338745 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
SATB1-201ENST00000338745 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
SATB1-201ENST00000338745 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
SATB1-201ENST00000338745 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
SATB1-201ENST00000338745 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
SATB1-201ENST00000338745 KRTAP5-9P26371 169 aa3.34□□□□□ -1.87
SATB1-201ENST00000338745 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
SATB1-201ENST00000338745 USH2AO75445 5202 aa3.16□□□□□ -1.9
SATB1-201ENST00000338745 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
SATB1-201ENST00000338745 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
SATB1-201ENST00000338745 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
SATB1-201ENST00000338745 NEBP20929 6669 aa3.06□□□□□ -1.92
SATB1-201ENST00000338745 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
SATB1-201ENST00000338745 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
SATB1-201ENST00000338745 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
SATB1-201ENST00000338745 MDN1Q9NU22 5596 aa2.64□□□□□ -1.99
SATB1-201ENST00000338745 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
SATB1-201ENST00000338745 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
SATB1-201ENST00000338745 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
SATB1-201ENST00000338745 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
SATB1-201ENST00000338745 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
SATB1-201ENST00000338745 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
SATB1-201ENST00000338745 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
SATB1-201ENST00000338745 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
SATB1-201ENST00000338745 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
SATB1-201ENST00000338745 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
SATB1-201ENST00000338745 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
SATB1-201ENST00000338745 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.07
SATB1-201ENST00000338745 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
SATB1-201ENST00000338745 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
SATB1-201ENST00000338745 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
SATB1-201ENST00000338745 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
SATB1-201ENST00000338745 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
SATB1-201ENST00000338745 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 86.3 ms