RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 MT1LQ93083 61 aa2.52□□□□□ -2.01
TRIM2-201ENST00000338700 ABCA13Q86UQ4 5058 aa2.52□□□□□ -2.01
TRIM2-201ENST00000338700 MT4P47944 62 aa2.51□□□□□ -2.01
TRIM2-201ENST00000338700 MT1EP04732 61 aa2.51□□□□□ -2.01
TRIM2-201ENST00000338700 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
TRIM2-201ENST00000338700 KRTAP2-3P0C7H8 128 aa2.48□□□□□ -2.01
TRIM2-201ENST00000338700 KRTAP2-4Q9BYR9 128 aa2.48□□□□□ -2.01
TRIM2-201ENST00000338700 KRTAP4-7Q9BYR0 210 aa2.45□□□□□ -2.02
TRIM2-201ENST00000338700 MT1MQ8N339 61 aa2.44□□□□□ -2.02
TRIM2-201ENST00000338700 MT3P25713 68 aa2.42□□□□□ -2.02
TRIM2-201ENST00000338700 PRM1P04553 51 aa2.4□□□□□ -2.02
TRIM2-201ENST00000338700 FAT4Q6V0I7 4981 aa2.39□□□□□ -2.03
TRIM2-201ENST00000338700 LCE1AQ5T7P2 110 aa2.38□□□□□ -2.03
TRIM2-201ENST00000338700 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
TRIM2-201ENST00000338700 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
TRIM2-201ENST00000338700 UBR4Q5T4S7 5183 aa2.35□□□□□ -2.03
TRIM2-201ENST00000338700 RNF213Q63HN8 5207 aa2.34□□□□□ -2.03
TRIM2-201ENST00000338700 LOC100996750A0A140TA64 210 aa2.33□□□□□ -2.04
TRIM2-201ENST00000338700 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
TRIM2-201ENST00000338700 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
TRIM2-201ENST00000338700 HMCN2Q8NDA2 5059 aa2.3□□□□□ -2.04
TRIM2-201ENST00000338700 FSIP2Q5CZC0 6907 aa2.29□□□□□ -2.04
TRIM2-201ENST00000338700 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
TRIM2-201ENST00000338700 LCE1DQ5T752 114 aa2.28□□□□□ -2.04
TRIM2-201ENST00000338700 SYNE2Q8WXH0 6885 aaKnown RBP2.28□□□□□ -2.04
TRIM2-201ENST00000338700 MT1AP04731 61 aa2.28□□□□□ -2.05
TRIM2-201ENST00000338700 KRTAP19-7Q3SYF9 63 aa2.27□□□□□ -2.05
TRIM2-201ENST00000338700 KRTAP4-9Q9BYQ8 210 aa2.24□□□□□ -2.05
TRIM2-201ENST00000338700 LCE5AQ5TCM9 118 aa2.17□□□□□ -2.06
TRIM2-201ENST00000338700 MUC2Q02817 5179 aa2.14□□□□□ -2.07
TRIM2-201ENST00000338700 KRTAP4-6Q9BYQ5 205 aa2.12□□□□□ -2.07
TRIM2-201ENST00000338700 KRTAP9-4Q9BYQ2 154 aa2.11□□□□□ -2.07
TRIM2-201ENST00000338700 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
TRIM2-201ENST00000338700 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
TRIM2-201ENST00000338700 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
TRIM2-201ENST00000338700 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
TRIM2-201ENST00000338700 KRTAP9-9Q9BYP9 154 aa2.02□□□□□ -2.09
TRIM2-201ENST00000338700 KRTAP9-6A8MVA2 160 aa2.01□□□□□ -2.09
TRIM2-201ENST00000338700 KMT2DO14686 5537 aa1.98□□□□□ -2.09
TRIM2-201ENST00000338700 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
TRIM2-201ENST00000338700 LCE1EQ5T753 118 aa1.98□□□□□ -2.09
TRIM2-201ENST00000338700 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
TRIM2-201ENST00000338700 NEBP20929 6669 aa1.97□□□□□ -2.09
TRIM2-201ENST00000338700 SSPOA2VEC9 5147 aa1.97□□□□□ -2.09
TRIM2-201ENST00000338700 USH2AO75445 5202 aa1.97□□□□□ -2.09
TRIM2-201ENST00000338700 MACF1Q9UPN3 7388 aaKnown RBP1.93□□□□□ -2.1
TRIM2-201ENST00000338700 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
TRIM2-201ENST00000338700 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
TRIM2-201ENST00000338700 FCGBPQ9Y6R7 5405 aaPredicted RBP1.85□□□□□ -2.11
TRIM2-201ENST00000338700 KRTAP5-4Q6L8H1 288 aa1.84□□□□□ -2.12
TRIM2-201ENST00000338700 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
TRIM2-201ENST00000338700 KRTAP4-11Q9BYQ6 195 aa1.75□□□□□ -2.13
TRIM2-201ENST00000338700 MDN1Q9NU22 5596 aa1.74□□□□□ -2.13
TRIM2-201ENST00000338700 DSTQ03001 7570 aaKnown RBP1.73□□□□□ -2.13
TRIM2-201ENST00000338700 KRTAP5-3Q6L8H2 238 aa1.67□□□□□ -2.14
TRIM2-201ENST00000338700 MUC12Q9UKN1 5478 aa1.62□□□□□ -2.15
TRIM2-201ENST00000338700 KRTAP5-5Q701N2 237 aaPredicted RBP1.6□□□□□ -2.15
TRIM2-201ENST00000338700 KRTAP4-12Q9BQ66 201 aa1.6□□□□□ -2.15
TRIM2-201ENST00000338700 KRTAP4-2Q9BYR5 136 aa1.6□□□□□ -2.15
TRIM2-201ENST00000338700 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
TRIM2-201ENST00000338700 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.17
TRIM2-201ENST00000338700 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
TRIM2-201ENST00000338700 KRTAP5-8O75690 187 aa1.49□□□□□ -2.17
TRIM2-201ENST00000338700 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
TRIM2-201ENST00000338700 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
TRIM2-201ENST00000338700 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.19
TRIM2-201ENST00000338700 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
TRIM2-201ENST00000338700 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
TRIM2-201ENST00000338700 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
TRIM2-201ENST00000338700 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
TRIM2-201ENST00000338700 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
TRIM2-201ENST00000338700 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
TRIM2-201ENST00000338700 KRTAP5-1Q6L8H4 278 aa1.22□□□□□ -2.21
TRIM2-201ENST00000338700 KRTAP5-11Q6L8G4 156 aa1.21□□□□□ -2.22
TRIM2-201ENST00000338700 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
TRIM2-201ENST00000338700 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
TRIM2-201ENST00000338700 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 168.4 ms