RNA–Protein interactions for RNA: ENST00000338353.3

FAM78B-201, Transcript of family with sequence similarity 78 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78B, Length 1,597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-201ENST00000338353 KRTAP2-4Q9BYR9 128 aa9.24□□□□□ -0.93
FAM78B-201ENST00000338353 PP632Q6XCG6 107 aa9.2□□□□□ -0.94
FAM78B-201ENST00000338353 KTN1-AS1Q86SY8 53 aa9.2□□□□□ -0.94
FAM78B-201ENST00000338353 MT1EP04732 61 aa9.17□□□□□ -0.94
FAM78B-201ENST00000338353 KRTAP19-5Q3LI72 72 aa9.15□□□□□ -0.95
FAM78B-201ENST00000338353 PRAC1Q96KF2 57 aa9.12□□□□□ -0.95
FAM78B-201ENST00000338353 KRTAP19-3Q7Z4W3 81 aa9.02□□□□□ -0.97
FAM78B-201ENST00000338353 LCE5AQ5TCM9 118 aa8.99□□□□□ -0.97
FAM78B-201ENST00000338353 KRTAP2-2Q9BYT5 123 aa8.97□□□□□ -0.97
FAM78B-201ENST00000338353 KRTAP2-1Q9BYU5 128 aa8.97□□□□□ -0.97
FAM78B-201ENST00000338353 KRTAP12-3P60328 96 aa8.96□□□□□ -0.97
FAM78B-201ENST00000338353 LCE3BQ5TA77 95 aa8.96□□□□□ -0.97
FAM78B-201ENST00000338353 MT1GP13640 62 aa8.84□□□□□ -0.99
FAM78B-201ENST00000338353 MT1LQ93083 61 aa8.83□□□□□ -1
FAM78B-201ENST00000338353 MT1MQ8N339 61 aa8.72□□□□□ -1.01
FAM78B-201ENST00000338353 KRTAP15-1Q3LI76 137 aa8.7□□□□□ -1.02
FAM78B-201ENST00000338353 SVIPQ8NHG7 77 aa8.68□□□□□ -1.02
FAM78B-201ENST00000338353 DSTQ03001 7570 aaKnown RBP8.66□□□□□ -1.02
FAM78B-201ENST00000338353 KRTAP4-3Q9BYR4 195 aa8.53□□□□□ -1.04
FAM78B-201ENST00000338353 KRTAP19-4Q3LI73 84 aa8.5□□□□□ -1.05
FAM78B-201ENST00000338353 KRTAP4-7Q9BYR0 210 aa8.45□□□□□ -1.06
FAM78B-201ENST00000338353 LCE3CQ5T5A8 94 aa8.35□□□□□ -1.07
FAM78B-201ENST00000338353 KRTAP4-9Q9BYQ8 210 aa8.27□□□□□ -1.09
FAM78B-201ENST00000338353 LCE4AQ5TA78 99 aa8.16□□□□□ -1.1
FAM78B-201ENST00000338353 LCE1DQ5T752 114 aa8.1□□□□□ -1.11
FAM78B-201ENST00000338353 MT4P47944 62 aa8.08□□□□□ -1.12
FAM78B-201ENST00000338353 KRTAP5-4Q6L8H1 288 aa8.08□□□□□ -1.12
FAM78B-201ENST00000338353 LOC100996750A0A140TA64 210 aa7.99□□□□□ -1.13
FAM78B-201ENST00000338353 SPRR5A0A1B0GTR4 108 aa7.99□□□□□ -1.13
FAM78B-201ENST00000338353 KRTAP5-5Q701N2 237 aaPredicted RBP7.93□□□□□ -1.14
FAM78B-201ENST00000338353 HMCN1Q96RW7 5635 aa7.9□□□□□ -1.14
FAM78B-201ENST00000338353 KRTAP4-6Q9BYQ5 205 aa7.88□□□□□ -1.15
FAM78B-201ENST00000338353 KRTAP9-6A8MVA2 160 aa7.86□□□□□ -1.15
FAM78B-201ENST00000338353 KRTAP12-4P60329 112 aa7.66□□□□□ -1.18
FAM78B-201ENST00000338353 KRTAP20-2Q3LI61 65 aa7.62□□□□□ -1.19
FAM78B-201ENST00000338353 GPR98Q8WXG9 6306 aa7.6□□□□□ -1.19
FAM78B-201ENST00000338353 SYNE1Q8NF91 8797 aaKnown RBP7.55□□□□□ -1.2
FAM78B-201ENST00000338353 MT1AP04731 61 aa7.51□□□□□ -1.21
FAM78B-201ENST00000338353 LUZP6Q538Z0 58 aa7.51□□□□□ -1.21
FAM78B-201ENST00000338353 AHNAK2Q8IVF2 5795 aa7.49□□□□□ -1.21
FAM78B-201ENST00000338353 KRTAP6-1Q3LI64 71 aa7.46□□□□□ -1.21
FAM78B-201ENST00000338353 KRTAP5-3Q6L8H2 238 aa7.37□□□□□ -1.23
FAM78B-201ENST00000338353 KRTAP5-10Q6L8G5 202 aa7.33□□□□□ -1.24
FAM78B-201ENST00000338353 KRTAP9-4Q9BYQ2 154 aa7.22□□□□□ -1.25
FAM78B-201ENST00000338353 KRTAP5-2Q701N4 177 aa7.14□□□□□ -1.27
FAM78B-201ENST00000338353 KRTAP6-2Q3LI66 62 aa7.07□□□□□ -1.28
FAM78B-201ENST00000338353 NDUFAF8A1L188 74 aa7.03□□□□□ -1.28
FAM78B-201ENST00000338353 KRTAP5-7Q6L8G8 165 aa6.99□□□□□ -1.29
FAM78B-201ENST00000338353 KRTAP4-11Q9BYQ6 195 aa6.87□□□□□ -1.31
FAM78B-201ENST00000338353 MT3P25713 68 aa6.85□□□□□ -1.31
FAM78B-201ENST00000338353 KRTAP5-8O75690 187 aa6.63□□□□□ -1.35
FAM78B-201ENST00000338353 OBSCNQ5VST9 7968 aa6.6□□□□□ -1.35
FAM78B-201ENST00000338353 KRTAP5-1Q6L8H4 278 aa6.35□□□□□ -1.39
FAM78B-201ENST00000338353 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
FAM78B-201ENST00000338353 LCE3DQ9BYE3 92 aa6.2□□□□□ -1.42
FAM78B-201ENST00000338353 LCE1EQ5T753 118 aa6.18□□□□□ -1.42
FAM78B-201ENST00000338353 MUC5ACP98088 5654 aa6.13□□□□□ -1.43
FAM78B-201ENST00000338353 A0A0A0MQY5 61 aa6.1□□□□□ -1.43
FAM78B-201ENST00000338353 MUC5BQ9HC84 5762 aaPredicted RBP6.09□□□□□ -1.43
FAM78B-201ENST00000338353 AHNAKQ09666 5890 aaKnown RBP6□□□□□ -1.45
FAM78B-201ENST00000338353 LCE3EQ5T5B0 92 aa6□□□□□ -1.45
FAM78B-201ENST00000338353 LCE1BQ5T7P3 118 aa5.86□□□□□ -1.47
FAM78B-201ENST00000338353 KRTAP4-2Q9BYR5 136 aa5.84□□□□□ -1.48
FAM78B-201ENST00000338353 INE1O15225 51 aa5.83□□□□□ -1.48
FAM78B-201ENST00000338353 LCE1CQ5T751 118 aa5.75□□□□□ -1.49
FAM78B-201ENST00000338353 H3BS24 57 aa5.46□□□□□ -1.53
FAM78B-201ENST00000338353 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.25□□□□□ -1.57
FAM78B-201ENST00000338353 KRTAP4-12Q9BQ66 201 aa5.21□□□□□ -1.58
FAM78B-201ENST00000338353 KRTAP5-11Q6L8G4 156 aa5.17□□□□□ -1.58
FAM78B-201ENST00000338353 PRM1P04553 51 aa5.05□□□□□ -1.6
FAM78B-201ENST00000338353 LCE1FQ5T754 118 aa4.93□□□□□ -1.62
FAM78B-201ENST00000338353 KRTAP21-2Q3LI59 83 aa4.9□□□□□ -1.63
FAM78B-201ENST00000338353 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
FAM78B-201ENST00000338353 PHGR1C9JFL3 82 aa4.46□□□□□ -1.7
FAM78B-201ENST00000338353 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
FAM78B-201ENST00000338353 KRTAP21-1Q3LI58 79 aa3.21□□□□□ -1.89
FAM78B-201ENST00000338353 MUC16Q8WXI7 14507 aa2.9□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 65.8 ms