RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
MSL3-202ENST00000337339 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
MSL3-202ENST00000337339 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
MSL3-202ENST00000337339 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.86
MSL3-202ENST00000337339 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
MSL3-202ENST00000337339 CRCT1Q9UGL9 99 aa3.39□□□□□ -1.87
MSL3-202ENST00000337339 KRTAP9-2Q9BYQ4 174 aa3.37□□□□□ -1.87
MSL3-202ENST00000337339 INE1O15225 51 aa3.37□□□□□ -1.87
MSL3-202ENST00000337339 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
MSL3-202ENST00000337339 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
MSL3-202ENST00000337339 MT1EP04732 61 aa3.35□□□□□ -1.87
MSL3-202ENST00000337339 MT1LQ93083 61 aa3.35□□□□□ -1.87
MSL3-202ENST00000337339 LCE3BQ5TA77 95 aa3.34□□□□□ -1.88
MSL3-202ENST00000337339 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
MSL3-202ENST00000337339 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
MSL3-202ENST00000337339 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
MSL3-202ENST00000337339 MT1GP13640 62 aa3.26□□□□□ -1.89
MSL3-202ENST00000337339 MACF1Q9UPN3 7388 aaKnown RBP3.24□□□□□ -1.89
MSL3-202ENST00000337339 SPRR2FQ96RM1 72 aa3.24□□□□□ -1.89
MSL3-202ENST00000337339 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
MSL3-202ENST00000337339 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
MSL3-202ENST00000337339 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
MSL3-202ENST00000337339 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
MSL3-202ENST00000337339 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
MSL3-202ENST00000337339 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
MSL3-202ENST00000337339 MT1MQ8N339 61 aa3.15□□□□□ -1.9
MSL3-202ENST00000337339 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
MSL3-202ENST00000337339 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
MSL3-202ENST00000337339 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
MSL3-202ENST00000337339 MDN1Q9NU22 5596 aa3.09□□□□□ -1.92
MSL3-202ENST00000337339 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
MSL3-202ENST00000337339 KRTAP4-9Q9BYQ8 210 aa2.97□□□□□ -1.93
MSL3-202ENST00000337339 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
MSL3-202ENST00000337339 SPRR2EP22531 72 aa2.94□□□□□ -1.94
MSL3-202ENST00000337339 SPRR2BP35325 72 aa2.94□□□□□ -1.94
MSL3-202ENST00000337339 SPRR2AP35326 72 aa2.94□□□□□ -1.94
MSL3-202ENST00000337339 MT3P25713 68 aa2.93□□□□□ -1.94
MSL3-202ENST00000337339 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
MSL3-202ENST00000337339 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
MSL3-202ENST00000337339 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
MSL3-202ENST00000337339 SPRR2DP22532 72 aa2.8□□□□□ -1.96
MSL3-202ENST00000337339 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
MSL3-202ENST00000337339 MT1AP04731 61 aa2.78□□□□□ -1.96
MSL3-202ENST00000337339 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
MSL3-202ENST00000337339 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
MSL3-202ENST00000337339 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
MSL3-202ENST00000337339 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
MSL3-202ENST00000337339 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
MSL3-202ENST00000337339 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
MSL3-202ENST00000337339 PRM1P04553 51 aa2.61□□□□□ -1.99
MSL3-202ENST00000337339 MT4P47944 62 aa2.57□□□□□ -2
MSL3-202ENST00000337339 NEBP20929 6669 aa2.48□□□□□ -2.01
MSL3-202ENST00000337339 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
MSL3-202ENST00000337339 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
MSL3-202ENST00000337339 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
MSL3-202ENST00000337339 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
MSL3-202ENST00000337339 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
MSL3-202ENST00000337339 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
MSL3-202ENST00000337339 KRTAP20-1Q3LI63 56 aa2.18□□□□□ -2.06
MSL3-202ENST00000337339 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
MSL3-202ENST00000337339 MUC5ACP98088 5654 aa2.15□□□□□ -2.06
MSL3-202ENST00000337339 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
MSL3-202ENST00000337339 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
MSL3-202ENST00000337339 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
MSL3-202ENST00000337339 KRTAP5-1Q6L8H4 278 aa1.91□□□□□ -2.1
MSL3-202ENST00000337339 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.11
MSL3-202ENST00000337339 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
MSL3-202ENST00000337339 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
MSL3-202ENST00000337339 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
MSL3-202ENST00000337339 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
MSL3-202ENST00000337339 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
MSL3-202ENST00000337339 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
MSL3-202ENST00000337339 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
MSL3-202ENST00000337339 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
MSL3-202ENST00000337339 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
MSL3-202ENST00000337339 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
MSL3-202ENST00000337339 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 95.1 ms