RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 KRTAP9-6A0A140TA67 174 aa7.27□□□□□ -1.25
PTDSS1-201ENST00000337004 SSPOA2VEC9 5147 aa7.26□□□□□ -1.25
PTDSS1-201ENST00000337004 LCE2DQ5TA82 110 aaPredicted RBP7.2□□□□□ -1.26
PTDSS1-201ENST00000337004 KRTAP4-3Q9BYR4 195 aa6.97□□□□□ -1.29
PTDSS1-201ENST00000337004 CRCT1Q9UGL9 99 aa6.96□□□□□ -1.3
PTDSS1-201ENST00000337004 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
PTDSS1-201ENST00000337004 MT1GP13640 62 aa6.95□□□□□ -1.3
PTDSS1-201ENST00000337004 KRTAP19-3Q7Z4W3 81 aa6.95□□□□□ -1.3
PTDSS1-201ENST00000337004 MT1MQ8N339 61 aa6.93□□□□□ -1.3
PTDSS1-201ENST00000337004 FSIP2Q5CZC0 6907 aa6.93□□□□□ -1.3
PTDSS1-201ENST00000337004 FCGBPQ9Y6R7 5405 aaPredicted RBP6.8□□□□□ -1.32
PTDSS1-201ENST00000337004 MUC12Q9UKN1 5478 aa6.72□□□□□ -1.33
PTDSS1-201ENST00000337004 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
PTDSS1-201ENST00000337004 SPRR2FQ96RM1 72 aa6.65□□□□□ -1.34
PTDSS1-201ENST00000337004 KRTAP12-4P60329 112 aa6.54□□□□□ -1.36
PTDSS1-201ENST00000337004 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
PTDSS1-201ENST00000337004 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
PTDSS1-201ENST00000337004 DSTQ03001 7570 aaKnown RBP6.41□□□□□ -1.38
PTDSS1-201ENST00000337004 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
PTDSS1-201ENST00000337004 MACF1Q9UPN3 7388 aaKnown RBP6.33□□□□□ -1.4
PTDSS1-201ENST00000337004 MT1AP04731 61 aa6.31□□□□□ -1.4
PTDSS1-201ENST00000337004 KRTAP6-1Q3LI64 71 aa6.29□□□□□ -1.4
PTDSS1-201ENST00000337004 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
PTDSS1-201ENST00000337004 LCE1AQ5T7P2 110 aa6.18□□□□□ -1.42
PTDSS1-201ENST00000337004 KRTAP5-9P26371 169 aa6.15□□□□□ -1.42
PTDSS1-201ENST00000337004 KRTAP5-5Q701N2 237 aaPredicted RBP6.11□□□□□ -1.43
PTDSS1-201ENST00000337004 LCE3DQ9BYE3 92 aa6.11□□□□□ -1.43
PTDSS1-201ENST00000337004 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
PTDSS1-201ENST00000337004 KRTAP6-3Q3LI67 103 aa6.1□□□□□ -1.43
PTDSS1-201ENST00000337004 MDN1Q9NU22 5596 aa6.07□□□□□ -1.44
PTDSS1-201ENST00000337004 LCE3EQ5T5B0 92 aa6.04□□□□□ -1.44
PTDSS1-201ENST00000337004 SYNE1Q8NF91 8797 aaKnown RBP6.04□□□□□ -1.44
PTDSS1-201ENST00000337004 SPRR2EP22531 72 aa6.03□□□□□ -1.44
PTDSS1-201ENST00000337004 SPRR2BP35325 72 aa6.03□□□□□ -1.44
PTDSS1-201ENST00000337004 SPRR2AP35326 72 aa6.03□□□□□ -1.44
PTDSS1-201ENST00000337004 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
PTDSS1-201ENST00000337004 SPRR2DP22532 72 aa5.78□□□□□ -1.48
PTDSS1-201ENST00000337004 NEBP20929 6669 aa5.77□□□□□ -1.49
PTDSS1-201ENST00000337004 PRM1P04553 51 aa5.76□□□□□ -1.49
PTDSS1-201ENST00000337004 KRTAP20-1Q3LI63 56 aa5.7□□□□□ -1.5
PTDSS1-201ENST00000337004 MT3P25713 68 aa5.65□□□□□ -1.51
PTDSS1-201ENST00000337004 KRTAP6-2Q3LI66 62 aa5.64□□□□□ -1.51
PTDSS1-201ENST00000337004 KRTAP5-4Q6L8H1 288 aa5.35□□□□□ -1.55
PTDSS1-201ENST00000337004 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
PTDSS1-201ENST00000337004 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
PTDSS1-201ENST00000337004 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
PTDSS1-201ENST00000337004 MT4P47944 62 aa5.07□□□□□ -1.6
PTDSS1-201ENST00000337004 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
PTDSS1-201ENST00000337004 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
PTDSS1-201ENST00000337004 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
PTDSS1-201ENST00000337004 GPR98Q8WXG9 6306 aa4.87□□□□□ -1.63
PTDSS1-201ENST00000337004 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
PTDSS1-201ENST00000337004 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
PTDSS1-201ENST00000337004 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
PTDSS1-201ENST00000337004 MUC5ACP98088 5654 aa4.62□□□□□ -1.67
PTDSS1-201ENST00000337004 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
PTDSS1-201ENST00000337004 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
PTDSS1-201ENST00000337004 KRTAP5-10Q6L8G5 202 aa4.51□□□□□ -1.69
PTDSS1-201ENST00000337004 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.69
PTDSS1-201ENST00000337004 KRTAP5-7Q6L8G8 165 aa4.46□□□□□ -1.7
PTDSS1-201ENST00000337004 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
PTDSS1-201ENST00000337004 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
PTDSS1-201ENST00000337004 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
PTDSS1-201ENST00000337004 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
PTDSS1-201ENST00000337004 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
PTDSS1-201ENST00000337004 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
PTDSS1-201ENST00000337004 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
PTDSS1-201ENST00000337004 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
PTDSS1-201ENST00000337004 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.81
PTDSS1-201ENST00000337004 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
PTDSS1-201ENST00000337004 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
PTDSS1-201ENST00000337004 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
PTDSS1-201ENST00000337004 KRTAP21-1Q3LI58 79 aa3.64□□□□□ -1.83
PTDSS1-201ENST00000337004 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
PTDSS1-201ENST00000337004 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
PTDSS1-201ENST00000337004 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
PTDSS1-201ENST00000337004 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
PTDSS1-201ENST00000337004 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 10 ms