RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
MRPL55-202ENST00000336300 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
MRPL55-202ENST00000336300 MT1GP13640 62 aa5.69□□□□□ -1.5
MRPL55-202ENST00000336300 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
MRPL55-202ENST00000336300 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
MRPL55-202ENST00000336300 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
MRPL55-202ENST00000336300 MT1LQ93083 61 aa5.63□□□□□ -1.51
MRPL55-202ENST00000336300 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
MRPL55-202ENST00000336300 ROMO1P60602 79 aa5.58□□□□□ -1.52
MRPL55-202ENST00000336300 DSTQ03001 7570 aaKnown RBP5.56□□□□□ -1.52
MRPL55-202ENST00000336300 MT1MQ8N339 61 aa5.55□□□□□ -1.52
MRPL55-202ENST00000336300 KRTAP19-4Q3LI73 84 aa5.4□□□□□ -1.54
MRPL55-202ENST00000336300 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
MRPL55-202ENST00000336300 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
MRPL55-202ENST00000336300 BRK1Q8WUW1 75 aa5.35□□□□□ -1.55
MRPL55-202ENST00000336300 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
MRPL55-202ENST00000336300 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
MRPL55-202ENST00000336300 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
MRPL55-202ENST00000336300 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
MRPL55-202ENST00000336300 MT4P47944 62 aa5.14□□□□□ -1.59
MRPL55-202ENST00000336300 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
MRPL55-202ENST00000336300 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
MRPL55-202ENST00000336300 PMAIP1Q13794 54 aa5.06□□□□□ -1.6
MRPL55-202ENST00000336300 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
MRPL55-202ENST00000336300 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
MRPL55-202ENST00000336300 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
MRPL55-202ENST00000336300 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
MRPL55-202ENST00000336300 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
MRPL55-202ENST00000336300 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
MRPL55-202ENST00000336300 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
MRPL55-202ENST00000336300 PRO0628Q9UI54 55 aa4.85□□□□□ -1.63
MRPL55-202ENST00000336300 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
MRPL55-202ENST00000336300 GPR98Q8WXG9 6306 aa4.81□□□□□ -1.64
MRPL55-202ENST00000336300 MT1AP04731 61 aa4.8□□□□□ -1.64
MRPL55-202ENST00000336300 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
MRPL55-202ENST00000336300 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
MRPL55-202ENST00000336300 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
MRPL55-202ENST00000336300 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
MRPL55-202ENST00000336300 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
MRPL55-202ENST00000336300 KRTAP5-10Q6L8G5 202 aa4.64□□□□□ -1.67
MRPL55-202ENST00000336300 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
MRPL55-202ENST00000336300 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
MRPL55-202ENST00000336300 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
MRPL55-202ENST00000336300 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
MRPL55-202ENST00000336300 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
MRPL55-202ENST00000336300 MT3P25713 68 aa4.43□□□□□ -1.7
MRPL55-202ENST00000336300 SVIPQ8NHG7 77 aa4.41□□□□□ -1.7
MRPL55-202ENST00000336300 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
MRPL55-202ENST00000336300 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
MRPL55-202ENST00000336300 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
MRPL55-202ENST00000336300 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
MRPL55-202ENST00000336300 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
MRPL55-202ENST00000336300 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
MRPL55-202ENST00000336300 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
MRPL55-202ENST00000336300 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
MRPL55-202ENST00000336300 MUC5BQ9HC84 5762 aaPredicted RBP3.9□□□□□ -1.79
MRPL55-202ENST00000336300 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
MRPL55-202ENST00000336300 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
MRPL55-202ENST00000336300 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
MRPL55-202ENST00000336300 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
MRPL55-202ENST00000336300 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
MRPL55-202ENST00000336300 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
MRPL55-202ENST00000336300 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
MRPL55-202ENST00000336300 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
MRPL55-202ENST00000336300 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
MRPL55-202ENST00000336300 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
MRPL55-202ENST00000336300 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
MRPL55-202ENST00000336300 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
MRPL55-202ENST00000336300 A0A0A0MQY5 61 aa2.89□□□□□ -1.95
MRPL55-202ENST00000336300 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
MRPL55-202ENST00000336300 INE1O15225 51 aa2.84□□□□□ -1.95
MRPL55-202ENST00000336300 PRM1P04553 51 aa2.84□□□□□ -1.95
MRPL55-202ENST00000336300 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
MRPL55-202ENST00000336300 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
MRPL55-202ENST00000336300 H3BS24 57 aa2.1□□□□□ -2.07
MRPL55-202ENST00000336300 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
MRPL55-202ENST00000336300 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms