RNA–Protein interactions for RNA: ENST00000335367.7

AGAP3-201, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best) BASIC

Gene AGAP3, Length 2,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-201ENST00000335367 KRTAP19-6Q3LI70 58 aa7.37□□□□□ -1.23
AGAP3-201ENST00000335367 KRTAP4-3Q9BYR4 195 aa7.35□□□□□ -1.23
AGAP3-201ENST00000335367 MT1GP13640 62 aa7.28□□□□□ -1.24
AGAP3-201ENST00000335367 CRCT1Q9UGL9 99 aa7.2□□□□□ -1.26
AGAP3-201ENST00000335367 KRTAP12-4P60329 112 aa7.18□□□□□ -1.26
AGAP3-201ENST00000335367 MUC12Q9UKN1 5478 aa7.13□□□□□ -1.27
AGAP3-201ENST00000335367 FCGBPQ9Y6R7 5405 aaPredicted RBP7.13□□□□□ -1.27
AGAP3-201ENST00000335367 LCE2DQ5TA82 110 aaPredicted RBP7.11□□□□□ -1.27
AGAP3-201ENST00000335367 MT1MQ8N339 61 aa7.07□□□□□ -1.28
AGAP3-201ENST00000335367 DSTQ03001 7570 aaKnown RBP7.05□□□□□ -1.28
AGAP3-201ENST00000335367 KRTAP19-3Q7Z4W3 81 aa7□□□□□ -1.29
AGAP3-201ENST00000335367 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
AGAP3-201ENST00000335367 KRTAP4-9Q9BYQ8 210 aa6.82□□□□□ -1.32
AGAP3-201ENST00000335367 MACF1Q9UPN3 7388 aaKnown RBP6.82□□□□□ -1.32
AGAP3-201ENST00000335367 SYNE1Q8NF91 8797 aaKnown RBP6.81□□□□□ -1.32
AGAP3-201ENST00000335367 SYNE2Q8WXH0 6885 aaKnown RBP6.79□□□□□ -1.32
AGAP3-201ENST00000335367 KRTAP9-2Q9BYQ4 174 aa6.75□□□□□ -1.33
AGAP3-201ENST00000335367 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
AGAP3-201ENST00000335367 SPRR2FQ96RM1 72 aa6.62□□□□□ -1.35
AGAP3-201ENST00000335367 MT1AP04731 61 aa6.57□□□□□ -1.36
AGAP3-201ENST00000335367 KRTAP6-1Q3LI64 71 aa6.55□□□□□ -1.36
AGAP3-201ENST00000335367 LCE3DQ9BYE3 92 aa6.52□□□□□ -1.37
AGAP3-201ENST00000335367 MDN1Q9NU22 5596 aa6.47□□□□□ -1.37
AGAP3-201ENST00000335367 KRTAP9-7A8MTY7 169 aa6.47□□□□□ -1.37
AGAP3-201ENST00000335367 LCE3EQ5T5B0 92 aa6.45□□□□□ -1.38
AGAP3-201ENST00000335367 KRTAP5-5Q701N2 237 aaPredicted RBP6.42□□□□□ -1.38
AGAP3-201ENST00000335367 PRM1P04553 51 aa6.41□□□□□ -1.38
AGAP3-201ENST00000335367 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
AGAP3-201ENST00000335367 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
AGAP3-201ENST00000335367 OBSCNQ5VST9 7968 aa6.16□□□□□ -1.42
AGAP3-201ENST00000335367 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.44
AGAP3-201ENST00000335367 SPRR2EP22531 72 aa6.08□□□□□ -1.44
AGAP3-201ENST00000335367 SPRR2BP35325 72 aa6.08□□□□□ -1.44
AGAP3-201ENST00000335367 SPRR2AP35326 72 aa6.08□□□□□ -1.44
AGAP3-201ENST00000335367 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
AGAP3-201ENST00000335367 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.98□□□□□ -1.45
AGAP3-201ENST00000335367 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
AGAP3-201ENST00000335367 KRTAP6-3Q3LI67 103 aa5.91□□□□□ -1.46
AGAP3-201ENST00000335367 SPRR2DP22532 72 aa5.84□□□□□ -1.47
AGAP3-201ENST00000335367 MT3P25713 68 aa5.72□□□□□ -1.49
AGAP3-201ENST00000335367 KRTAP2-2Q9BYT5 123 aa5.66□□□□□ -1.5
AGAP3-201ENST00000335367 NEBP20929 6669 aa5.54□□□□□ -1.52
AGAP3-201ENST00000335367 KRTAP5-4Q6L8H1 288 aa5.45□□□□□ -1.54
AGAP3-201ENST00000335367 LCE4AQ5TA78 99 aa5.19□□□□□ -1.58
AGAP3-201ENST00000335367 MT4P47944 62 aa5.15□□□□□ -1.59
AGAP3-201ENST00000335367 KRTAP4-6Q9BYQ5 205 aa5.1□□□□□ -1.59
AGAP3-201ENST00000335367 KRTAP20-2Q3LI61 65 aa5.06□□□□□ -1.6
AGAP3-201ENST00000335367 KRTAP5-2Q701N4 177 aa5.06□□□□□ -1.6
AGAP3-201ENST00000335367 HMCN1Q96RW7 5635 aa5□□□□□ -1.61
AGAP3-201ENST00000335367 MUC5ACP98088 5654 aa4.98□□□□□ -1.61
AGAP3-201ENST00000335367 LCE1EQ5T753 118 aa4.92□□□□□ -1.62
AGAP3-201ENST00000335367 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
AGAP3-201ENST00000335367 LCE1FQ5T754 118 aa4.87□□□□□ -1.63
AGAP3-201ENST00000335367 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
AGAP3-201ENST00000335367 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
AGAP3-201ENST00000335367 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.63
AGAP3-201ENST00000335367 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
AGAP3-201ENST00000335367 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
AGAP3-201ENST00000335367 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
AGAP3-201ENST00000335367 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
AGAP3-201ENST00000335367 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.72
AGAP3-201ENST00000335367 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
AGAP3-201ENST00000335367 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
AGAP3-201ENST00000335367 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
AGAP3-201ENST00000335367 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
AGAP3-201ENST00000335367 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
AGAP3-201ENST00000335367 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
AGAP3-201ENST00000335367 MUC19Q7Z5P9 8384 aa4.07□□□□□ -1.76
AGAP3-201ENST00000335367 KRTAP21-1Q3LI58 79 aa4□□□□□ -1.77
AGAP3-201ENST00000335367 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
AGAP3-201ENST00000335367 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
AGAP3-201ENST00000335367 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
AGAP3-201ENST00000335367 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
AGAP3-201ENST00000335367 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
AGAP3-201ENST00000335367 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
AGAP3-201ENST00000335367 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
AGAP3-201ENST00000335367 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms