RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 PP632Q6XCG6 107 aa8.8□□□□□ -1
CDKN3-202ENST00000335183 LCE4AQ5TA78 99 aa8.78□□□□□ -1
CDKN3-202ENST00000335183 A0A1B0GU69 56 aa8.75□□□□□ -1.01
CDKN3-202ENST00000335183 SPINT4Q6UDR6 99 aa8.75□□□□□ -1.01
CDKN3-202ENST00000335183 SPATA8Q6RVD6 105 aa8.73□□□□□ -1.01
CDKN3-202ENST00000335183 MT1MQ8N339 61 aa8.71□□□□□ -1.02
CDKN3-202ENST00000335183 HMCN1Q96RW7 5635 aa8.67□□□□□ -1.02
CDKN3-202ENST00000335183 PMAIP1Q13794 54 aa8.65□□□□□ -1.02
CDKN3-202ENST00000335183 MT1LQ93083 61 aa8.63□□□□□ -1.03
CDKN3-202ENST00000335183 UQCR11O14957 56 aa8.61□□□□□ -1.03
CDKN3-202ENST00000335183 KRTAP12-1P59990 96 aa8.59□□□□□ -1.03
CDKN3-202ENST00000335183 KRTAP4-3Q9BYR4 195 aa8.56□□□□□ -1.04
CDKN3-202ENST00000335183 A8MU10 97 aa8.54□□□□□ -1.04
CDKN3-202ENST00000335183 AHNAK2Q8IVF2 5795 aa8.54□□□□□ -1.04
CDKN3-202ENST00000335183 KTN1-AS1Q86SY8 53 aa8.53□□□□□ -1.04
CDKN3-202ENST00000335183 KRTAP5-4Q6L8H1 288 aa8.52□□□□□ -1.05
CDKN3-202ENST00000335183 MIR22HGQ0VDD5 57 aa8.5□□□□□ -1.05
CDKN3-202ENST00000335183 KRTAP5-10Q6L8G5 202 aa8.48□□□□□ -1.05
CDKN3-202ENST00000335183 KRTAP4-6Q9BYQ5 205 aa8.48□□□□□ -1.05
CDKN3-202ENST00000335183 C10orf95Q9H7T3 257 aa8.46□□□□□ -1.06
CDKN3-202ENST00000335183 LCE3AQ5TA76 89 aa8.43□□□□□ -1.06
CDKN3-202ENST00000335183 TNP1P09430 55 aa8.33□□□□□ -1.08
CDKN3-202ENST00000335183 KRTAP4-7Q9BYR0 210 aa8.23□□□□□ -1.09
CDKN3-202ENST00000335183 KRTAP5-3Q6L8H2 238 aa8.21□□□□□ -1.1
CDKN3-202ENST00000335183 KRTAP5-7Q6L8G8 165 aa8.2□□□□□ -1.1
CDKN3-202ENST00000335183 K7ERS5 55 aa8.16□□□□□ -1.1
CDKN3-202ENST00000335183 KRTAP20-2Q3LI61 65 aa8.1□□□□□ -1.11
CDKN3-202ENST00000335183 KRTAP12-3P60328 96 aa8.09□□□□□ -1.11
CDKN3-202ENST00000335183 KRTAP5-5Q701N2 237 aaPredicted RBP7.99□□□□□ -1.13
CDKN3-202ENST00000335183 SPRR5A0A1B0GTR4 108 aa7.98□□□□□ -1.13
CDKN3-202ENST00000335183 KRTAP12-4P60329 112 aa7.93□□□□□ -1.14
CDKN3-202ENST00000335183 PRAC1Q96KF2 57 aa7.91□□□□□ -1.14
CDKN3-202ENST00000335183 LOC100996750A0A140TA64 210 aa7.82□□□□□ -1.16
CDKN3-202ENST00000335183 ROMO1P60602 79 aa7.81□□□□□ -1.16
CDKN3-202ENST00000335183 KRTAP25-1Q3LHN0 102 aa7.78□□□□□ -1.16
CDKN3-202ENST00000335183 SYNE1Q8NF91 8797 aaKnown RBP7.74□□□□□ -1.17
CDKN3-202ENST00000335183 KRTAP23-1A1A580 65 aa7.53□□□□□ -1.2
CDKN3-202ENST00000335183 KRTAP19-4Q3LI73 84 aa7.53□□□□□ -1.2
CDKN3-202ENST00000335183 KRTAP4-11Q9BYQ6 195 aa7.49□□□□□ -1.21
CDKN3-202ENST00000335183 KRTAP15-1Q3LI76 137 aa7.41□□□□□ -1.22
CDKN3-202ENST00000335183 LCE3CQ5T5A8 94 aa7.4□□□□□ -1.22
CDKN3-202ENST00000335183 KRTAP5-2Q701N4 177 aa7.38□□□□□ -1.23
CDKN3-202ENST00000335183 MT1AP04731 61 aa7.34□□□□□ -1.23
CDKN3-202ENST00000335183 KRTAP6-1Q3LI64 71 aa7.33□□□□□ -1.24
CDKN3-202ENST00000335183 KRTAP5-8O75690 187 aa7.25□□□□□ -1.25
CDKN3-202ENST00000335183 KRTAP9-4Q9BYQ2 154 aa7.14□□□□□ -1.27
CDKN3-202ENST00000335183 KRTAP6-2Q3LI66 62 aa7.09□□□□□ -1.27
CDKN3-202ENST00000335183 MUC5ACP98088 5654 aa7.09□□□□□ -1.28
CDKN3-202ENST00000335183 AHNAKQ09666 5890 aaKnown RBP7.09□□□□□ -1.28
CDKN3-202ENST00000335183 MUC5BQ9HC84 5762 aaPredicted RBP7.05□□□□□ -1.28
CDKN3-202ENST00000335183 OBSCNQ5VST9 7968 aa7.03□□□□□ -1.28
CDKN3-202ENST00000335183 KRTAP9-6A8MVA2 160 aa6.99□□□□□ -1.29
CDKN3-202ENST00000335183 KRTAP9-9Q9BYP9 154 aa6.97□□□□□ -1.29
CDKN3-202ENST00000335183 MT3P25713 68 aa6.74□□□□□ -1.33
CDKN3-202ENST00000335183 H3BS24 57 aa6.71□□□□□ -1.34
CDKN3-202ENST00000335183 KRTAP5-1Q6L8H4 278 aa6.71□□□□□ -1.34
CDKN3-202ENST00000335183 NDUFAF8A1L188 74 aa6.63□□□□□ -1.35
CDKN3-202ENST00000335183 KRTAP4-12Q9BQ66 201 aa6.61□□□□□ -1.35
CDKN3-202ENST00000335183 LUZP6Q538Z0 58 aa6.57□□□□□ -1.36
CDKN3-202ENST00000335183 LCE1EQ5T753 118 aa6.24□□□□□ -1.41
CDKN3-202ENST00000335183 A0A0A0MQY5 61 aa6.14□□□□□ -1.43
CDKN3-202ENST00000335183 LCE1BQ5T7P3 118 aa6□□□□□ -1.45
CDKN3-202ENST00000335183 KRTAP4-2Q9BYR5 136 aa5.97□□□□□ -1.45
CDKN3-202ENST00000335183 LCE1CQ5T751 118 aa5.8□□□□□ -1.48
CDKN3-202ENST00000335183 INE1O15225 51 aa5.69□□□□□ -1.5
CDKN3-202ENST00000335183 KRTAP5-11Q6L8G4 156 aa5.3□□□□□ -1.56
CDKN3-202ENST00000335183 LCE1FQ5T754 118 aa5.25□□□□□ -1.57
CDKN3-202ENST00000335183 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
CDKN3-202ENST00000335183 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.21□□□□□ -1.58
CDKN3-202ENST00000335183 PHGR1C9JFL3 82 aa5□□□□□ -1.61
CDKN3-202ENST00000335183 LCE3EQ5T5B0 92 aa4.89□□□□□ -1.63
CDKN3-202ENST00000335183 KRTAP21-2Q3LI59 83 aa4.82□□□□□ -1.64
CDKN3-202ENST00000335183 KRTAP4-4Q9BYR3 166 aa4.54□□□□□ -1.68
CDKN3-202ENST00000335183 MUC19Q7Z5P9 8384 aa4.36□□□□□ -1.71
CDKN3-202ENST00000335183 PRM1P04553 51 aa4.04□□□□□ -1.76
CDKN3-202ENST00000335183 KRTAP21-1Q3LI58 79 aa3.77□□□□□ -1.81
CDKN3-202ENST00000335183 MUC16Q8WXI7 14507 aa3.02□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms