RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 MT4P47944 62 aa2.03□□□□□ -2.08
CPEB4-202ENST00000334035 LPAP08519 4548 aa2.02□□□□□ -2.09
CPEB4-202ENST00000334035 KRTAP20-1Q3LI63 56 aa2.01□□□□□ -2.09
CPEB4-202ENST00000334035 MT3P25713 68 aa2□□□□□ -2.09
CPEB4-202ENST00000334035 KIAA1109Q2LD37 5005 aa1.99□□□□□ -2.09
CPEB4-202ENST00000334035 KRTAP19-7Q3SYF9 63 aa1.99□□□□□ -2.09
CPEB4-202ENST00000334035 LOC100996750A0A140TA64 210 aa1.97□□□□□ -2.09
CPEB4-202ENST00000334035 KRTAP19-6Q3LI70 58 aa1.97□□□□□ -2.09
CPEB4-202ENST00000334035 KMT2CQ8NEZ4 4911 aaKnown RBP1.97□□□□□ -2.09
CPEB4-202ENST00000334035 KRTAP9-7A8MTY7 169 aa1.95□□□□□ -2.1
CPEB4-202ENST00000334035 KRTAP4-3Q9BYR4 195 aa1.91□□□□□ -2.1
CPEB4-202ENST00000334035 PCLOQ9Y6V0 5065 aa1.91□□□□□ -2.1
CPEB4-202ENST00000334035 KRTAP9-6A8MVA2 160 aa1.89□□□□□ -2.11
CPEB4-202ENST00000334035 LCE4AQ5TA78 99 aa1.85□□□□□ -2.11
CPEB4-202ENST00000334035 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
CPEB4-202ENST00000334035 KRTAP4-9Q9BYQ8 210 aa1.84□□□□□ -2.11
CPEB4-202ENST00000334035 LCE1DQ5T752 114 aa1.83□□□□□ -2.12
CPEB4-202ENST00000334035 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.83□□□□□ -2.12
CPEB4-202ENST00000334035 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
CPEB4-202ENST00000334035 EPPK1P58107 5090 aaKnown RBP1.82□□□□□ -2.12
CPEB4-202ENST00000334035 KRTAP6-2Q3LI66 62 aa1.81□□□□□ -2.12
CPEB4-202ENST00000334035 KRTAP9-4Q9BYQ2 154 aa1.8□□□□□ -2.12
CPEB4-202ENST00000334035 ABCA13Q86UQ4 5058 aa1.79□□□□□ -2.12
CPEB4-202ENST00000334035 KRTAP2-2Q9BYT5 123 aa1.79□□□□□ -2.12
CPEB4-202ENST00000334035 LCE5AQ5TCM9 118 aa1.79□□□□□ -2.12
CPEB4-202ENST00000334035 HMCN2Q8NDA2 5059 aa1.78□□□□□ -2.12
CPEB4-202ENST00000334035 RNF213Q63HN8 5207 aa1.78□□□□□ -2.12
CPEB4-202ENST00000334035 LCE1AQ5T7P2 110 aa1.78□□□□□ -2.13
CPEB4-202ENST00000334035 KRTAP6-1Q3LI64 71 aa1.77□□□□□ -2.13
CPEB4-202ENST00000334035 SYNE2Q8WXH0 6885 aaKnown RBP1.76□□□□□ -2.13
CPEB4-202ENST00000334035 KRTAP4-6Q9BYQ5 205 aa1.73□□□□□ -2.13
CPEB4-202ENST00000334035 FAT4Q6V0I7 4981 aa1.73□□□□□ -2.13
CPEB4-202ENST00000334035 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
CPEB4-202ENST00000334035 LCE1EQ5T753 118 aa1.67□□□□□ -2.14
CPEB4-202ENST00000334035 LCE1FQ5T754 118 aa1.67□□□□□ -2.14
CPEB4-202ENST00000334035 UBR4Q5T4S7 5183 aa1.65□□□□□ -2.15
CPEB4-202ENST00000334035 KRTAP9-9Q9BYP9 154 aa1.61□□□□□ -2.15
CPEB4-202ENST00000334035 FSIP2Q5CZC0 6907 aa1.61□□□□□ -2.15
CPEB4-202ENST00000334035 KRTAP4-12Q9BQ66 201 aa1.58□□□□□ -2.16
CPEB4-202ENST00000334035 MUC2Q02817 5179 aa1.55□□□□□ -2.16
CPEB4-202ENST00000334035 USH2AO75445 5202 aa1.54□□□□□ -2.16
CPEB4-202ENST00000334035 SYNE1Q8NF91 8797 aaKnown RBP1.53□□□□□ -2.16
CPEB4-202ENST00000334035 KRTAP5-5Q701N2 237 aaPredicted RBP1.53□□□□□ -2.17
CPEB4-202ENST00000334035 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
CPEB4-202ENST00000334035 NEBP20929 6669 aa1.5□□□□□ -2.17
CPEB4-202ENST00000334035 KRTAP4-11Q9BYQ6 195 aa1.48□□□□□ -2.17
CPEB4-202ENST00000334035 KRTAP5-9P26371 169 aa1.47□□□□□ -2.17
CPEB4-202ENST00000334035 KRTAP4-2Q9BYR5 136 aa1.46□□□□□ -2.18
CPEB4-202ENST00000334035 MDN1Q9NU22 5596 aa1.41□□□□□ -2.18
CPEB4-202ENST00000334035 SSPOA2VEC9 5147 aa1.41□□□□□ -2.18
CPEB4-202ENST00000334035 OBSCNQ5VST9 7968 aa1.4□□□□□ -2.19
CPEB4-202ENST00000334035 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
CPEB4-202ENST00000334035 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
CPEB4-202ENST00000334035 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
CPEB4-202ENST00000334035 KMT2DO14686 5537 aa1.36□□□□□ -2.19
CPEB4-202ENST00000334035 MUC12Q9UKN1 5478 aa1.34□□□□□ -2.2
CPEB4-202ENST00000334035 MACF1Q9UPN3 7388 aaKnown RBP1.33□□□□□ -2.2
CPEB4-202ENST00000334035 GPR98Q8WXG9 6306 aa1.32□□□□□ -2.2
CPEB4-202ENST00000334035 KRTAP5-4Q6L8H1 288 aa1.32□□□□□ -2.2
CPEB4-202ENST00000334035 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
CPEB4-202ENST00000334035 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
CPEB4-202ENST00000334035 KRTAP4-4Q9BYR3 166 aa1.26□□□□□ -2.21
CPEB4-202ENST00000334035 KRTAP5-3Q6L8H2 238 aa1.24□□□□□ -2.21
CPEB4-202ENST00000334035 MUC19Q7Z5P9 8384 aa1.2□□□□□ -2.22
CPEB4-202ENST00000334035 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
CPEB4-202ENST00000334035 DSTQ03001 7570 aaKnown RBP1.16□□□□□ -2.22
CPEB4-202ENST00000334035 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
CPEB4-202ENST00000334035 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
CPEB4-202ENST00000334035 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
CPEB4-202ENST00000334035 KRTAP5-8O75690 187 aa1.07□□□□□ -2.24
CPEB4-202ENST00000334035 KRTAP5-11Q6L8G4 156 aa1.04□□□□□ -2.24
CPEB4-202ENST00000334035 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
CPEB4-202ENST00000334035 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
CPEB4-202ENST00000334035 KRTAP5-1Q6L8H4 278 aa1.02□□□□□ -2.25
CPEB4-202ENST00000334035 KRTAP21-2Q3LI59 83 aa0.97□□□□□ -2.25
CPEB4-202ENST00000334035 KRTAP5-7Q6L8G8 165 aa0.93□□□□□ -2.26
CPEB4-202ENST00000334035 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 90 ms