RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 MT1LQ93083 61 aa3.79□□□□□ -1.8
POLR1B-202ENST00000333990 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
POLR1B-202ENST00000333990 FSIP2Q5CZC0 6907 aa3.74□□□□□ -1.81
POLR1B-202ENST00000333990 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
POLR1B-202ENST00000333990 MT1MQ8N339 61 aa3.67□□□□□ -1.82
POLR1B-202ENST00000333990 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
POLR1B-202ENST00000333990 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
POLR1B-202ENST00000333990 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
POLR1B-202ENST00000333990 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
POLR1B-202ENST00000333990 MUC2Q02817 5179 aa3.55□□□□□ -1.84
POLR1B-202ENST00000333990 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
POLR1B-202ENST00000333990 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
POLR1B-202ENST00000333990 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
POLR1B-202ENST00000333990 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
POLR1B-202ENST00000333990 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
POLR1B-202ENST00000333990 MT3P25713 68 aa3.47□□□□□ -1.85
POLR1B-202ENST00000333990 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
POLR1B-202ENST00000333990 MT4P47944 62 aa3.44□□□□□ -1.86
POLR1B-202ENST00000333990 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
POLR1B-202ENST00000333990 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
POLR1B-202ENST00000333990 MT1AP04731 61 aa3.4□□□□□ -1.87
POLR1B-202ENST00000333990 LOC100996750A0A140TA64 210 aa3.38□□□□□ -1.87
POLR1B-202ENST00000333990 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
POLR1B-202ENST00000333990 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
POLR1B-202ENST00000333990 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
POLR1B-202ENST00000333990 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.87
POLR1B-202ENST00000333990 USH2AO75445 5202 aa3.33□□□□□ -1.88
POLR1B-202ENST00000333990 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.88
POLR1B-202ENST00000333990 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
POLR1B-202ENST00000333990 LCE4AQ5TA78 99 aa3.26□□□□□ -1.89
POLR1B-202ENST00000333990 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
POLR1B-202ENST00000333990 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
POLR1B-202ENST00000333990 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
POLR1B-202ENST00000333990 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
POLR1B-202ENST00000333990 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
POLR1B-202ENST00000333990 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
POLR1B-202ENST00000333990 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
POLR1B-202ENST00000333990 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
POLR1B-202ENST00000333990 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
POLR1B-202ENST00000333990 SSPOA2VEC9 5147 aa3.08□□□□□ -1.92
POLR1B-202ENST00000333990 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
POLR1B-202ENST00000333990 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
POLR1B-202ENST00000333990 KMT2DO14686 5537 aa3.06□□□□□ -1.92
POLR1B-202ENST00000333990 PRM1P04553 51 aa3□□□□□ -1.93
POLR1B-202ENST00000333990 NEBP20929 6669 aa2.95□□□□□ -1.94
POLR1B-202ENST00000333990 MUC12Q9UKN1 5478 aa2.89□□□□□ -1.95
POLR1B-202ENST00000333990 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
POLR1B-202ENST00000333990 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
POLR1B-202ENST00000333990 KRTAP4-6Q9BYQ5 205 aa2.75□□□□□ -1.97
POLR1B-202ENST00000333990 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
POLR1B-202ENST00000333990 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
POLR1B-202ENST00000333990 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
POLR1B-202ENST00000333990 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
POLR1B-202ENST00000333990 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
POLR1B-202ENST00000333990 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
POLR1B-202ENST00000333990 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
POLR1B-202ENST00000333990 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
POLR1B-202ENST00000333990 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
POLR1B-202ENST00000333990 KRTAP5-3Q6L8H2 238 aa2.38□□□□□ -2.03
POLR1B-202ENST00000333990 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
POLR1B-202ENST00000333990 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
POLR1B-202ENST00000333990 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
POLR1B-202ENST00000333990 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
POLR1B-202ENST00000333990 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.06
POLR1B-202ENST00000333990 KRTAP4-2Q9BYR5 136 aa2.21□□□□□ -2.06
POLR1B-202ENST00000333990 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
POLR1B-202ENST00000333990 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
POLR1B-202ENST00000333990 KRTAP5-1Q6L8H4 278 aa1.91□□□□□ -2.1
POLR1B-202ENST00000333990 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
POLR1B-202ENST00000333990 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
POLR1B-202ENST00000333990 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
POLR1B-202ENST00000333990 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
POLR1B-202ENST00000333990 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
POLR1B-202ENST00000333990 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
POLR1B-202ENST00000333990 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
POLR1B-202ENST00000333990 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
POLR1B-202ENST00000333990 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
POLR1B-202ENST00000333990 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 71 ms