RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 KRTAP2-3P0C7H8 128 aa6.85□□□□□ -1.31
LINC01006-201ENST00000333319 KRTAP2-4Q9BYR9 128 aa6.85□□□□□ -1.31
LINC01006-201ENST00000333319 KRTAP2-1Q9BYU5 128 aa6.85□□□□□ -1.31
LINC01006-201ENST00000333319 MUC12Q9UKN1 5478 aa6.81□□□□□ -1.32
LINC01006-201ENST00000333319 KRTAP4-3Q9BYR4 195 aa6.77□□□□□ -1.33
LINC01006-201ENST00000333319 KRTAP19-3Q7Z4W3 81 aa6.74□□□□□ -1.33
LINC01006-201ENST00000333319 CRCT1Q9UGL9 99 aa6.71□□□□□ -1.33
LINC01006-201ENST00000333319 MT1MQ8N339 61 aa6.71□□□□□ -1.34
LINC01006-201ENST00000333319 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
LINC01006-201ENST00000333319 MT1GP13640 62 aa6.7□□□□□ -1.34
LINC01006-201ENST00000333319 SPRR2FQ96RM1 72 aa6.59□□□□□ -1.36
LINC01006-201ENST00000333319 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
LINC01006-201ENST00000333319 LCE5AQ5TCM9 118 aa6.52□□□□□ -1.37
LINC01006-201ENST00000333319 DSTQ03001 7570 aaKnown RBP6.47□□□□□ -1.37
LINC01006-201ENST00000333319 SYNE2Q8WXH0 6885 aaKnown RBP6.4□□□□□ -1.38
LINC01006-201ENST00000333319 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
LINC01006-201ENST00000333319 MDN1Q9NU22 5596 aa6.26□□□□□ -1.41
LINC01006-201ENST00000333319 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
LINC01006-201ENST00000333319 KRTAP5-9P26371 169 aa6.19□□□□□ -1.42
LINC01006-201ENST00000333319 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.42
LINC01006-201ENST00000333319 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
LINC01006-201ENST00000333319 KRTAP6-1Q3LI64 71 aa6.06□□□□□ -1.44
LINC01006-201ENST00000333319 KRTAP6-3Q3LI67 103 aa6.05□□□□□ -1.44
LINC01006-201ENST00000333319 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
LINC01006-201ENST00000333319 SPRR2EP22531 72 aa6.03□□□□□ -1.44
LINC01006-201ENST00000333319 SPRR2BP35325 72 aa6.03□□□□□ -1.44
LINC01006-201ENST00000333319 SPRR2AP35326 72 aa6.03□□□□□ -1.44
LINC01006-201ENST00000333319 MT1AP04731 61 aa6□□□□□ -1.45
LINC01006-201ENST00000333319 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.46
LINC01006-201ENST00000333319 KRTAP5-5Q701N2 237 aaPredicted RBP5.95□□□□□ -1.46
LINC01006-201ENST00000333319 SYNE1Q8NF91 8797 aaKnown RBP5.92□□□□□ -1.46
LINC01006-201ENST00000333319 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
LINC01006-201ENST00000333319 SPRR2DP22532 72 aa5.77□□□□□ -1.49
LINC01006-201ENST00000333319 LCE3DQ9BYE3 92 aa5.73□□□□□ -1.49
LINC01006-201ENST00000333319 NEBP20929 6669 aa5.7□□□□□ -1.5
LINC01006-201ENST00000333319 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
LINC01006-201ENST00000333319 LCE3EQ5T5B0 92 aa5.64□□□□□ -1.51
LINC01006-201ENST00000333319 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.53
LINC01006-201ENST00000333319 MT3P25713 68 aa5.41□□□□□ -1.54
LINC01006-201ENST00000333319 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
LINC01006-201ENST00000333319 PRM1P04553 51 aa5.31□□□□□ -1.56
LINC01006-201ENST00000333319 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
LINC01006-201ENST00000333319 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
LINC01006-201ENST00000333319 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
LINC01006-201ENST00000333319 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
LINC01006-201ENST00000333319 MT4P47944 62 aa5.09□□□□□ -1.59
LINC01006-201ENST00000333319 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
LINC01006-201ENST00000333319 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
LINC01006-201ENST00000333319 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
LINC01006-201ENST00000333319 LCE1DQ5T752 114 aa4.9□□□□□ -1.62
LINC01006-201ENST00000333319 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
LINC01006-201ENST00000333319 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
LINC01006-201ENST00000333319 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
LINC01006-201ENST00000333319 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
LINC01006-201ENST00000333319 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
LINC01006-201ENST00000333319 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
LINC01006-201ENST00000333319 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
LINC01006-201ENST00000333319 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
LINC01006-201ENST00000333319 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
LINC01006-201ENST00000333319 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
LINC01006-201ENST00000333319 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.73
LINC01006-201ENST00000333319 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
LINC01006-201ENST00000333319 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
LINC01006-201ENST00000333319 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
LINC01006-201ENST00000333319 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
LINC01006-201ENST00000333319 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
LINC01006-201ENST00000333319 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
LINC01006-201ENST00000333319 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
LINC01006-201ENST00000333319 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
LINC01006-201ENST00000333319 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.84
LINC01006-201ENST00000333319 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
LINC01006-201ENST00000333319 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
LINC01006-201ENST00000333319 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
LINC01006-201ENST00000333319 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
LINC01006-201ENST00000333319 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
LINC01006-201ENST00000333319 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
LINC01006-201ENST00000333319 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 72.6 ms