RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 LCE2AQ5TA79 106 aaPredicted RBP4.24□□□□□ -1.73
VSTM4-202ENST00000332853 FSIP2Q5CZC0 6907 aa4.24□□□□□ -1.73
VSTM4-202ENST00000332853 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
VSTM4-202ENST00000332853 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
VSTM4-202ENST00000332853 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
VSTM4-202ENST00000332853 MT1MQ8N339 61 aa4.15□□□□□ -1.74
VSTM4-202ENST00000332853 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.75
VSTM4-202ENST00000332853 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
VSTM4-202ENST00000332853 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
VSTM4-202ENST00000332853 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
VSTM4-202ENST00000332853 KRTAP9-6A0A140TA67 174 aa3.98□□□□□ -1.77
VSTM4-202ENST00000332853 MT4P47944 62 aa3.95□□□□□ -1.78
VSTM4-202ENST00000332853 SYNE2Q8WXH0 6885 aaKnown RBP3.88□□□□□ -1.79
VSTM4-202ENST00000332853 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
VSTM4-202ENST00000332853 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
VSTM4-202ENST00000332853 MT3P25713 68 aa3.83□□□□□ -1.8
VSTM4-202ENST00000332853 KMT2DO14686 5537 aa3.79□□□□□ -1.8
VSTM4-202ENST00000332853 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.8
VSTM4-202ENST00000332853 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
VSTM4-202ENST00000332853 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
VSTM4-202ENST00000332853 PRM1P04553 51 aa3.78□□□□□ -1.8
VSTM4-202ENST00000332853 MT1AP04731 61 aa3.76□□□□□ -1.81
VSTM4-202ENST00000332853 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
VSTM4-202ENST00000332853 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
VSTM4-202ENST00000332853 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
VSTM4-202ENST00000332853 USH2AO75445 5202 aa3.69□□□□□ -1.82
VSTM4-202ENST00000332853 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
VSTM4-202ENST00000332853 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
VSTM4-202ENST00000332853 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
VSTM4-202ENST00000332853 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
VSTM4-202ENST00000332853 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.6□□□□□ -1.83
VSTM4-202ENST00000332853 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
VSTM4-202ENST00000332853 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
VSTM4-202ENST00000332853 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
VSTM4-202ENST00000332853 FCGBPQ9Y6R7 5405 aaPredicted RBP3.55□□□□□ -1.84
VSTM4-202ENST00000332853 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
VSTM4-202ENST00000332853 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
VSTM4-202ENST00000332853 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
VSTM4-202ENST00000332853 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
VSTM4-202ENST00000332853 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
VSTM4-202ENST00000332853 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
VSTM4-202ENST00000332853 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
VSTM4-202ENST00000332853 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
VSTM4-202ENST00000332853 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
VSTM4-202ENST00000332853 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
VSTM4-202ENST00000332853 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
VSTM4-202ENST00000332853 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
VSTM4-202ENST00000332853 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
VSTM4-202ENST00000332853 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
VSTM4-202ENST00000332853 NEBP20929 6669 aa3.04□□□□□ -1.92
VSTM4-202ENST00000332853 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
VSTM4-202ENST00000332853 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
VSTM4-202ENST00000332853 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
VSTM4-202ENST00000332853 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
VSTM4-202ENST00000332853 MDN1Q9NU22 5596 aa2.84□□□□□ -1.95
VSTM4-202ENST00000332853 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
VSTM4-202ENST00000332853 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
VSTM4-202ENST00000332853 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
VSTM4-202ENST00000332853 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
VSTM4-202ENST00000332853 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
VSTM4-202ENST00000332853 MUC5ACP98088 5654 aa2.46□□□□□ -2.01
VSTM4-202ENST00000332853 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
VSTM4-202ENST00000332853 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
VSTM4-202ENST00000332853 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
VSTM4-202ENST00000332853 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
VSTM4-202ENST00000332853 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
VSTM4-202ENST00000332853 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
VSTM4-202ENST00000332853 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
VSTM4-202ENST00000332853 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
VSTM4-202ENST00000332853 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
VSTM4-202ENST00000332853 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
VSTM4-202ENST00000332853 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
VSTM4-202ENST00000332853 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
VSTM4-202ENST00000332853 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
VSTM4-202ENST00000332853 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
VSTM4-202ENST00000332853 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
VSTM4-202ENST00000332853 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 193.8 ms