RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 KRTAP12-3P60328 96 aa9.33□□□□□ -0.92
SMDT1-201ENST00000331479 KRTAP23-1A1A580 65 aa9.29□□□□□ -0.92
SMDT1-201ENST00000331479 MT1LQ93083 61 aa9.28□□□□□ -0.92
SMDT1-201ENST00000331479 KRTAP2-3P0C7H8 128 aa9.27□□□□□ -0.93
SMDT1-201ENST00000331479 KRTAP2-4Q9BYR9 128 aa9.27□□□□□ -0.93
SMDT1-201ENST00000331479 MT1GP13640 62 aa9.21□□□□□ -0.93
SMDT1-201ENST00000331479 LCE3BQ5TA77 95 aa9.11□□□□□ -0.95
SMDT1-201ENST00000331479 PP632Q6XCG6 107 aa9.1□□□□□ -0.95
SMDT1-201ENST00000331479 MT1MQ8N339 61 aa9.1□□□□□ -0.95
SMDT1-201ENST00000331479 DSTQ03001 7570 aaKnown RBP9.08□□□□□ -0.96
SMDT1-201ENST00000331479 KRTAP2-2Q9BYT5 123 aa9.01□□□□□ -0.97
SMDT1-201ENST00000331479 KRTAP2-1Q9BYU5 128 aa9.01□□□□□ -0.97
SMDT1-201ENST00000331479 KRTAP4-3Q9BYR4 195 aa8.92□□□□□ -0.98
SMDT1-201ENST00000331479 KRTAP4-7Q9BYR0 210 aa8.91□□□□□ -0.98
SMDT1-201ENST00000331479 KRTAP15-1Q3LI76 137 aa8.9□□□□□ -0.98
SMDT1-201ENST00000331479 PMAIP1Q13794 54 aa8.86□□□□□ -0.99
SMDT1-201ENST00000331479 KRTAP19-4Q3LI73 84 aa8.73□□□□□ -1.01
SMDT1-201ENST00000331479 PRO0628Q9UI54 55 aa8.7□□□□□ -1.02
SMDT1-201ENST00000331479 LCE3CQ5T5A8 94 aa8.65□□□□□ -1.03
SMDT1-201ENST00000331479 PRAC1Q96KF2 57 aa8.45□□□□□ -1.06
SMDT1-201ENST00000331479 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
SMDT1-201ENST00000331479 KRTAP4-9Q9BYQ8 210 aa8.36□□□□□ -1.07
SMDT1-201ENST00000331479 LCE4AQ5TA78 99 aa8.32□□□□□ -1.08
SMDT1-201ENST00000331479 KRTAP5-4Q6L8H1 288 aa8.31□□□□□ -1.08
SMDT1-201ENST00000331479 KRTAP5-5Q701N2 237 aaPredicted RBP8.3□□□□□ -1.08
SMDT1-201ENST00000331479 LCE1DQ5T752 114 aa8.22□□□□□ -1.09
SMDT1-201ENST00000331479 MT4P47944 62 aa8.21□□□□□ -1.1
SMDT1-201ENST00000331479 KRTAP9-6A8MVA2 160 aa8.2□□□□□ -1.1
SMDT1-201ENST00000331479 KTN1-AS1Q86SY8 53 aa8.19□□□□□ -1.1
SMDT1-201ENST00000331479 HMCN1Q96RW7 5635 aa8.1□□□□□ -1.11
SMDT1-201ENST00000331479 KRTAP4-6Q9BYQ5 205 aa8.06□□□□□ -1.12
SMDT1-201ENST00000331479 SYNE1Q8NF91 8797 aaKnown RBP7.98□□□□□ -1.13
SMDT1-201ENST00000331479 MT1AP04731 61 aa7.88□□□□□ -1.15
SMDT1-201ENST00000331479 KRTAP12-4P60329 112 aa7.88□□□□□ -1.15
SMDT1-201ENST00000331479 KRTAP6-1Q3LI64 71 aa7.84□□□□□ -1.15
SMDT1-201ENST00000331479 KRTAP20-2Q3LI61 65 aa7.81□□□□□ -1.16
SMDT1-201ENST00000331479 SPRR5A0A1B0GTR4 108 aa7.8□□□□□ -1.16
SMDT1-201ENST00000331479 SVIPQ8NHG7 77 aa7.78□□□□□ -1.16
SMDT1-201ENST00000331479 AHNAK2Q8IVF2 5795 aa7.59□□□□□ -1.19
SMDT1-201ENST00000331479 KRTAP5-3Q6L8H2 238 aa7.58□□□□□ -1.2
SMDT1-201ENST00000331479 GPR98Q8WXG9 6306 aa7.58□□□□□ -1.2
SMDT1-201ENST00000331479 KRTAP9-4Q9BYQ2 154 aa7.57□□□□□ -1.2
SMDT1-201ENST00000331479 KRTAP5-2Q701N4 177 aa7.4□□□□□ -1.22
SMDT1-201ENST00000331479 KRTAP6-2Q3LI66 62 aa7.37□□□□□ -1.23
SMDT1-201ENST00000331479 KRTAP5-10Q6L8G5 202 aa7.32□□□□□ -1.24
SMDT1-201ENST00000331479 MT3P25713 68 aa7.16□□□□□ -1.26
SMDT1-201ENST00000331479 KRTAP4-11Q9BYQ6 195 aa6.99□□□□□ -1.29
SMDT1-201ENST00000331479 OBSCNQ5VST9 7968 aa6.96□□□□□ -1.3
SMDT1-201ENST00000331479 LUZP6Q538Z0 58 aa6.95□□□□□ -1.3
SMDT1-201ENST00000331479 KRTAP5-7Q6L8G8 165 aa6.92□□□□□ -1.3
SMDT1-201ENST00000331479 KRTAP5-8O75690 187 aa6.75□□□□□ -1.33
SMDT1-201ENST00000331479 KRTAP5-1Q6L8H4 278 aa6.54□□□□□ -1.36
SMDT1-201ENST00000331479 LCE1EQ5T753 118 aa6.44□□□□□ -1.38
SMDT1-201ENST00000331479 MUC5ACP98088 5654 aa6.4□□□□□ -1.39
SMDT1-201ENST00000331479 LCE3DQ9BYE3 92 aa6.34□□□□□ -1.39
SMDT1-201ENST00000331479 KRTAP9-9Q9BYP9 154 aa6.25□□□□□ -1.41
SMDT1-201ENST00000331479 NDUFAF8A1L188 74 aa6.2□□□□□ -1.42
SMDT1-201ENST00000331479 MUC5BQ9HC84 5762 aaPredicted RBP6.14□□□□□ -1.43
SMDT1-201ENST00000331479 KRTAP4-2Q9BYR5 136 aa6.07□□□□□ -1.44
SMDT1-201ENST00000331479 LCE3EQ5T5B0 92 aa6.06□□□□□ -1.44
SMDT1-201ENST00000331479 LCE1BQ5T7P3 118 aa6.06□□□□□ -1.44
SMDT1-201ENST00000331479 AHNAKQ09666 5890 aaKnown RBP6.03□□□□□ -1.44
SMDT1-201ENST00000331479 LCE1CQ5T751 118 aa5.98□□□□□ -1.45
SMDT1-201ENST00000331479 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.52□□□□□ -1.53
SMDT1-201ENST00000331479 KRTAP5-11Q6L8G4 156 aa5.36□□□□□ -1.55
SMDT1-201ENST00000331479 KRTAP4-12Q9BQ66 201 aa5.3□□□□□ -1.56
SMDT1-201ENST00000331479 KRTAP21-2Q3LI59 83 aa5.16□□□□□ -1.58
SMDT1-201ENST00000331479 A0A0A0MQY5 61 aa5.12□□□□□ -1.59
SMDT1-201ENST00000331479 LCE1FQ5T754 118 aa5.04□□□□□ -1.6
SMDT1-201ENST00000331479 INE1O15225 51 aa5.02□□□□□ -1.61
SMDT1-201ENST00000331479 PRM1P04553 51 aa4.91□□□□□ -1.62
SMDT1-201ENST00000331479 KRTAP4-4Q9BYR3 166 aa4.66□□□□□ -1.66
SMDT1-201ENST00000331479 PHGR1C9JFL3 82 aa4.62□□□□□ -1.67
SMDT1-201ENST00000331479 H3BS24 57 aa4.27□□□□□ -1.73
SMDT1-201ENST00000331479 MUC19Q7Z5P9 8384 aa4.25□□□□□ -1.73
SMDT1-201ENST00000331479 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
SMDT1-201ENST00000331479 MUC16Q8WXI7 14507 aa2.99□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms