RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 LCE2DQ5TA82 110 aaPredicted RBP8.01□□□□□ -1.13
SOX1-201ENST00000330949 MT1EP04732 61 aa7.93□□□□□ -1.14
SOX1-201ENST00000330949 KRTAP12-4P60329 112 aa7.93□□□□□ -1.14
SOX1-201ENST00000330949 MUC12Q9UKN1 5478 aa7.91□□□□□ -1.14
SOX1-201ENST00000330949 CRCT1Q9UGL9 99 aa7.9□□□□□ -1.15
SOX1-201ENST00000330949 SYNE2Q8WXH0 6885 aaKnown RBP7.88□□□□□ -1.15
SOX1-201ENST00000330949 MACF1Q9UPN3 7388 aaKnown RBP7.88□□□□□ -1.15
SOX1-201ENST00000330949 DSTQ03001 7570 aaKnown RBP7.83□□□□□ -1.16
SOX1-201ENST00000330949 KRTAP4-3Q9BYR4 195 aa7.81□□□□□ -1.16
SOX1-201ENST00000330949 LOC100996750A0A140TA64 210 aa7.78□□□□□ -1.16
SOX1-201ENST00000330949 KRTAP9-6A0A140TA67 174 aa7.75□□□□□ -1.17
SOX1-201ENST00000330949 KRTAP19-6Q3LI70 58 aa7.71□□□□□ -1.18
SOX1-201ENST00000330949 MT1GP13640 62 aa7.64□□□□□ -1.19
SOX1-201ENST00000330949 MT1MQ8N339 61 aa7.42□□□□□ -1.22
SOX1-201ENST00000330949 KRTAP19-3Q7Z4W3 81 aa7.38□□□□□ -1.23
SOX1-201ENST00000330949 MDN1Q9NU22 5596 aa7.36□□□□□ -1.23
SOX1-201ENST00000330949 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.33□□□□□ -1.24
SOX1-201ENST00000330949 SPRR2FQ96RM1 72 aa7.31□□□□□ -1.24
SOX1-201ENST00000330949 SYNE1Q8NF91 8797 aaKnown RBP7.3□□□□□ -1.24
SOX1-201ENST00000330949 MT1AP04731 61 aa7.23□□□□□ -1.25
SOX1-201ENST00000330949 LCE3BQ5TA77 95 aa7.23□□□□□ -1.25
SOX1-201ENST00000330949 KRTAP4-9Q9BYQ8 210 aa7.17□□□□□ -1.26
SOX1-201ENST00000330949 LCE5AQ5TCM9 118 aa7.12□□□□□ -1.27
SOX1-201ENST00000330949 PRM1P04553 51 aa7.1□□□□□ -1.27
SOX1-201ENST00000330949 KRTAP9-7A8MTY7 169 aa7.09□□□□□ -1.27
SOX1-201ENST00000330949 LCE3DQ9BYE3 92 aa7.09□□□□□ -1.28
SOX1-201ENST00000330949 LCE3EQ5T5B0 92 aa7.07□□□□□ -1.28
SOX1-201ENST00000330949 KRTAP5-5Q701N2 237 aaPredicted RBP7.02□□□□□ -1.29
SOX1-201ENST00000330949 OBSCNQ5VST9 7968 aa6.98□□□□□ -1.29
SOX1-201ENST00000330949 KRTAP6-3Q3LI67 103 aa6.86□□□□□ -1.31
SOX1-201ENST00000330949 KRTAP6-1Q3LI64 71 aa6.84□□□□□ -1.31
SOX1-201ENST00000330949 NEBP20929 6669 aa6.73□□□□□ -1.33
SOX1-201ENST00000330949 KRTAP5-9P26371 169 aa6.73□□□□□ -1.33
SOX1-201ENST00000330949 SPRR2EP22531 72 aa6.72□□□□□ -1.33
SOX1-201ENST00000330949 SPRR2BP35325 72 aa6.72□□□□□ -1.33
SOX1-201ENST00000330949 SPRR2AP35326 72 aa6.72□□□□□ -1.33
SOX1-201ENST00000330949 LCE1AQ5T7P2 110 aa6.69□□□□□ -1.34
SOX1-201ENST00000330949 KRTAP2-2Q9BYT5 123 aa6.68□□□□□ -1.34
SOX1-201ENST00000330949 KRTAP6-2Q3LI66 62 aa6.63□□□□□ -1.35
SOX1-201ENST00000330949 SPRR2DP22532 72 aa6.44□□□□□ -1.38
SOX1-201ENST00000330949 KRTAP9-4Q9BYQ2 154 aa6.28□□□□□ -1.4
SOX1-201ENST00000330949 LCE1EQ5T753 118 aa6.25□□□□□ -1.41
SOX1-201ENST00000330949 KRTAP20-1Q3LI63 56 aa6.16□□□□□ -1.42
SOX1-201ENST00000330949 MT3P25713 68 aa6.03□□□□□ -1.44
SOX1-201ENST00000330949 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
SOX1-201ENST00000330949 MT4P47944 62 aa5.86□□□□□ -1.47
SOX1-201ENST00000330949 HMCN1Q96RW7 5635 aa5.79□□□□□ -1.48
SOX1-201ENST00000330949 KRTAP4-6Q9BYQ5 205 aa5.72□□□□□ -1.49
SOX1-201ENST00000330949 KRTAP5-4Q6L8H1 288 aa5.64□□□□□ -1.51
SOX1-201ENST00000330949 LCE4AQ5TA78 99 aa5.4□□□□□ -1.55
SOX1-201ENST00000330949 KRTAP20-2Q3LI61 65 aa5.39□□□□□ -1.55
SOX1-201ENST00000330949 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
SOX1-201ENST00000330949 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
SOX1-201ENST00000330949 MUC5ACP98088 5654 aa5.19□□□□□ -1.58
SOX1-201ENST00000330949 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.59
SOX1-201ENST00000330949 LCE1FQ5T754 118 aa5.12□□□□□ -1.59
SOX1-201ENST00000330949 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
SOX1-201ENST00000330949 LCE1BQ5T7P3 118 aa5.08□□□□□ -1.6
SOX1-201ENST00000330949 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
SOX1-201ENST00000330949 KRTAP5-10Q6L8G5 202 aa5.06□□□□□ -1.6
SOX1-201ENST00000330949 KRTAP5-1Q6L8H4 278 aa4.87□□□□□ -1.63
SOX1-201ENST00000330949 MUC19Q7Z5P9 8384 aa4.71□□□□□ -1.65
SOX1-201ENST00000330949 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
SOX1-201ENST00000330949 KRTAP21-1Q3LI58 79 aa4.57□□□□□ -1.68
SOX1-201ENST00000330949 KRTAP5-8O75690 187 aa4.54□□□□□ -1.68
SOX1-201ENST00000330949 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
SOX1-201ENST00000330949 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
SOX1-201ENST00000330949 KRTAP21-2Q3LI59 83 aa4.37□□□□□ -1.71
SOX1-201ENST00000330949 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
SOX1-201ENST00000330949 KRTAP4-4Q9BYR3 166 aa4.31□□□□□ -1.72
SOX1-201ENST00000330949 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
SOX1-201ENST00000330949 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
SOX1-201ENST00000330949 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
SOX1-201ENST00000330949 AHNAKQ09666 5890 aaKnown RBP3.94□□□□□ -1.78
SOX1-201ENST00000330949 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.8
SOX1-201ENST00000330949 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
SOX1-201ENST00000330949 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms