RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
PTP4A3-201ENST00000329397 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
PTP4A3-201ENST00000329397 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
PTP4A3-201ENST00000329397 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
PTP4A3-201ENST00000329397 CRCT1Q9UGL9 99 aa5.71□□□□□ -1.5
PTP4A3-201ENST00000329397 KRTAP19-6Q3LI70 58 aa5.71□□□□□ -1.5
PTP4A3-201ENST00000329397 MT1GP13640 62 aa5.7□□□□□ -1.5
PTP4A3-201ENST00000329397 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
PTP4A3-201ENST00000329397 MT1MQ8N339 61 aa5.57□□□□□ -1.52
PTP4A3-201ENST00000329397 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
PTP4A3-201ENST00000329397 KRTAP19-3Q7Z4W3 81 aa5.53□□□□□ -1.52
PTP4A3-201ENST00000329397 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
PTP4A3-201ENST00000329397 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.53
PTP4A3-201ENST00000329397 SYNE1Q8NF91 8797 aaKnown RBP5.44□□□□□ -1.54
PTP4A3-201ENST00000329397 SPRR2FQ96RM1 72 aa5.39□□□□□ -1.55
PTP4A3-201ENST00000329397 KRTAP9-2Q9BYQ4 174 aa5.37□□□□□ -1.55
PTP4A3-201ENST00000329397 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
PTP4A3-201ENST00000329397 MDN1Q9NU22 5596 aa5.33□□□□□ -1.56
PTP4A3-201ENST00000329397 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
PTP4A3-201ENST00000329397 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
PTP4A3-201ENST00000329397 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
PTP4A3-201ENST00000329397 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
PTP4A3-201ENST00000329397 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
PTP4A3-201ENST00000329397 LCE1EQ5T753 118 aa5.15□□□□□ -1.58
PTP4A3-201ENST00000329397 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
PTP4A3-201ENST00000329397 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
PTP4A3-201ENST00000329397 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
PTP4A3-201ENST00000329397 MT1AP04731 61 aa4.95□□□□□ -1.62
PTP4A3-201ENST00000329397 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
PTP4A3-201ENST00000329397 LCE3DQ9BYE3 92 aa4.92□□□□□ -1.62
PTP4A3-201ENST00000329397 SPRR2EP22531 72 aa4.89□□□□□ -1.63
PTP4A3-201ENST00000329397 SPRR2BP35325 72 aa4.89□□□□□ -1.63
PTP4A3-201ENST00000329397 SPRR2AP35326 72 aa4.89□□□□□ -1.63
PTP4A3-201ENST00000329397 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
PTP4A3-201ENST00000329397 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
PTP4A3-201ENST00000329397 KRTAP5-9P26371 169 aa4.84□□□□□ -1.63
PTP4A3-201ENST00000329397 LCE3EQ5T5B0 92 aa4.83□□□□□ -1.64
PTP4A3-201ENST00000329397 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
PTP4A3-201ENST00000329397 PRM1P04553 51 aa4.79□□□□□ -1.64
PTP4A3-201ENST00000329397 LCE1FQ5T754 118 aa4.74□□□□□ -1.65
PTP4A3-201ENST00000329397 SPRR2DP22532 72 aa4.65□□□□□ -1.66
PTP4A3-201ENST00000329397 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
PTP4A3-201ENST00000329397 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
PTP4A3-201ENST00000329397 MT3P25713 68 aa4.43□□□□□ -1.7
PTP4A3-201ENST00000329397 NEBP20929 6669 aa4.43□□□□□ -1.7
PTP4A3-201ENST00000329397 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
PTP4A3-201ENST00000329397 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
PTP4A3-201ENST00000329397 MT4P47944 62 aa4.25□□□□□ -1.73
PTP4A3-201ENST00000329397 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
PTP4A3-201ENST00000329397 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
PTP4A3-201ENST00000329397 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
PTP4A3-201ENST00000329397 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
PTP4A3-201ENST00000329397 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
PTP4A3-201ENST00000329397 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
PTP4A3-201ENST00000329397 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
PTP4A3-201ENST00000329397 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
PTP4A3-201ENST00000329397 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
PTP4A3-201ENST00000329397 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
PTP4A3-201ENST00000329397 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.82
PTP4A3-201ENST00000329397 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
PTP4A3-201ENST00000329397 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
PTP4A3-201ENST00000329397 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
PTP4A3-201ENST00000329397 LCE1CQ5T751 118 aa3.4□□□□□ -1.86
PTP4A3-201ENST00000329397 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
PTP4A3-201ENST00000329397 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
PTP4A3-201ENST00000329397 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
PTP4A3-201ENST00000329397 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
PTP4A3-201ENST00000329397 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
PTP4A3-201ENST00000329397 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
PTP4A3-201ENST00000329397 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
PTP4A3-201ENST00000329397 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
PTP4A3-201ENST00000329397 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
PTP4A3-201ENST00000329397 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
PTP4A3-201ENST00000329397 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
PTP4A3-201ENST00000329397 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
PTP4A3-201ENST00000329397 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
PTP4A3-201ENST00000329397 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 22.9 ms