RNA–Protein interactions for RNA: ENST00000327359.7

BRF1-201, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-201ENST00000327359 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
BRF1-201ENST00000327359 MT1EP04732 61 aa5.46□□□□□ -1.53
BRF1-201ENST00000327359 MT1LQ93083 61 aa5.41□□□□□ -1.54
BRF1-201ENST00000327359 KRTAP9-6A0A140TA67 174 aa5.39□□□□□ -1.55
BRF1-201ENST00000327359 MACF1Q9UPN3 7388 aaKnown RBP5.32□□□□□ -1.56
BRF1-201ENST00000327359 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
BRF1-201ENST00000327359 MUC12Q9UKN1 5478 aa5.26□□□□□ -1.57
BRF1-201ENST00000327359 SYNE2Q8WXH0 6885 aaKnown RBP5.24□□□□□ -1.57
BRF1-201ENST00000327359 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
BRF1-201ENST00000327359 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
BRF1-201ENST00000327359 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
BRF1-201ENST00000327359 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
BRF1-201ENST00000327359 MT1GP13640 62 aa5.13□□□□□ -1.59
BRF1-201ENST00000327359 MT1MQ8N339 61 aa5.13□□□□□ -1.59
BRF1-201ENST00000327359 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.09□□□□□ -1.59
BRF1-201ENST00000327359 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
BRF1-201ENST00000327359 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
BRF1-201ENST00000327359 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
BRF1-201ENST00000327359 MDN1Q9NU22 5596 aa4.95□□□□□ -1.62
BRF1-201ENST00000327359 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
BRF1-201ENST00000327359 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.63
BRF1-201ENST00000327359 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
BRF1-201ENST00000327359 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
BRF1-201ENST00000327359 SPRR2EP22531 72 aa4.85□□□□□ -1.63
BRF1-201ENST00000327359 SPRR2BP35325 72 aa4.85□□□□□ -1.63
BRF1-201ENST00000327359 SPRR2AP35326 72 aa4.85□□□□□ -1.63
BRF1-201ENST00000327359 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
BRF1-201ENST00000327359 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
BRF1-201ENST00000327359 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
BRF1-201ENST00000327359 NEBP20929 6669 aa4.65□□□□□ -1.66
BRF1-201ENST00000327359 MT1AP04731 61 aa4.65□□□□□ -1.66
BRF1-201ENST00000327359 SPRR2DP22532 72 aa4.65□□□□□ -1.66
BRF1-201ENST00000327359 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
BRF1-201ENST00000327359 PRM1P04553 51 aa4.58□□□□□ -1.68
BRF1-201ENST00000327359 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
BRF1-201ENST00000327359 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
BRF1-201ENST00000327359 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
BRF1-201ENST00000327359 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
BRF1-201ENST00000327359 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
BRF1-201ENST00000327359 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
BRF1-201ENST00000327359 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
BRF1-201ENST00000327359 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
BRF1-201ENST00000327359 MT4P47944 62 aa4.12□□□□□ -1.75
BRF1-201ENST00000327359 MT3P25713 68 aa4.11□□□□□ -1.75
BRF1-201ENST00000327359 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
BRF1-201ENST00000327359 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
BRF1-201ENST00000327359 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
BRF1-201ENST00000327359 LCE1EQ5T753 118 aa4□□□□□ -1.77
BRF1-201ENST00000327359 KRTAP20-2Q3LI61 65 aa3.95□□□□□ -1.78
BRF1-201ENST00000327359 HMCN1Q96RW7 5635 aa3.94□□□□□ -1.78
BRF1-201ENST00000327359 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
BRF1-201ENST00000327359 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
BRF1-201ENST00000327359 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
BRF1-201ENST00000327359 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
BRF1-201ENST00000327359 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
BRF1-201ENST00000327359 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
BRF1-201ENST00000327359 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
BRF1-201ENST00000327359 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
BRF1-201ENST00000327359 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
BRF1-201ENST00000327359 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
BRF1-201ENST00000327359 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
BRF1-201ENST00000327359 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
BRF1-201ENST00000327359 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
BRF1-201ENST00000327359 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
BRF1-201ENST00000327359 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
BRF1-201ENST00000327359 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
BRF1-201ENST00000327359 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
BRF1-201ENST00000327359 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
BRF1-201ENST00000327359 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
BRF1-201ENST00000327359 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
BRF1-201ENST00000327359 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
BRF1-201ENST00000327359 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
BRF1-201ENST00000327359 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
BRF1-201ENST00000327359 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
BRF1-201ENST00000327359 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
BRF1-201ENST00000327359 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
BRF1-201ENST00000327359 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 37.9 ms