RNA–Protein interactions for RNA: ENST00000326654.6

ERGIC1-201, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best) BASIC

Gene ERGIC1, Length 3,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-201ENST00000326654 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
ERGIC1-201ENST00000326654 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
ERGIC1-201ENST00000326654 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
ERGIC1-201ENST00000326654 KRTAP8-1Q8IUC2 63 aa3.16□□□□□ -1.9
ERGIC1-201ENST00000326654 USH2AO75445 5202 aa3.14□□□□□ -1.91
ERGIC1-201ENST00000326654 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
ERGIC1-201ENST00000326654 CRCT1Q9UGL9 99 aa3.11□□□□□ -1.91
ERGIC1-201ENST00000326654 KRTAP19-5Q3LI72 72 aa3.07□□□□□ -1.92
ERGIC1-201ENST00000326654 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
ERGIC1-201ENST00000326654 SSPOA2VEC9 5147 aa2.99□□□□□ -1.93
ERGIC1-201ENST00000326654 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
ERGIC1-201ENST00000326654 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
ERGIC1-201ENST00000326654 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
ERGIC1-201ENST00000326654 KMT2DO14686 5537 aa2.91□□□□□ -1.94
ERGIC1-201ENST00000326654 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.95
ERGIC1-201ENST00000326654 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
ERGIC1-201ENST00000326654 MT1EP04732 61 aa2.88□□□□□ -1.95
ERGIC1-201ENST00000326654 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
ERGIC1-201ENST00000326654 SPRR2EP22531 72 aa2.86□□□□□ -1.95
ERGIC1-201ENST00000326654 SPRR2BP35325 72 aa2.86□□□□□ -1.95
ERGIC1-201ENST00000326654 SPRR2AP35326 72 aa2.86□□□□□ -1.95
ERGIC1-201ENST00000326654 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
ERGIC1-201ENST00000326654 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
ERGIC1-201ENST00000326654 MT1LQ93083 61 aa2.84□□□□□ -1.96
ERGIC1-201ENST00000326654 MT1GP13640 62 aa2.83□□□□□ -1.96
ERGIC1-201ENST00000326654 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
ERGIC1-201ENST00000326654 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
ERGIC1-201ENST00000326654 MT3P25713 68 aa2.77□□□□□ -1.97
ERGIC1-201ENST00000326654 SPRR2DP22532 72 aa2.76□□□□□ -1.97
ERGIC1-201ENST00000326654 MT1MQ8N339 61 aa2.74□□□□□ -1.97
ERGIC1-201ENST00000326654 KRTAP6-3Q3LI67 103 aa2.74□□□□□ -1.97
ERGIC1-201ENST00000326654 MUC12Q9UKN1 5478 aa2.73□□□□□ -1.97
ERGIC1-201ENST00000326654 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
ERGIC1-201ENST00000326654 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
ERGIC1-201ENST00000326654 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
ERGIC1-201ENST00000326654 KRTAP2-3P0C7H8 128 aa2.7□□□□□ -1.98
ERGIC1-201ENST00000326654 KRTAP2-4Q9BYR9 128 aa2.7□□□□□ -1.98
ERGIC1-201ENST00000326654 KRTAP2-1Q9BYU5 128 aa2.7□□□□□ -1.98
ERGIC1-201ENST00000326654 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
ERGIC1-201ENST00000326654 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
ERGIC1-201ENST00000326654 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
ERGIC1-201ENST00000326654 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
ERGIC1-201ENST00000326654 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
ERGIC1-201ENST00000326654 MDN1Q9NU22 5596 aa2.59□□□□□ -1.99
ERGIC1-201ENST00000326654 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
ERGIC1-201ENST00000326654 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
ERGIC1-201ENST00000326654 NEBP20929 6669 aa2.5□□□□□ -2.01
ERGIC1-201ENST00000326654 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
ERGIC1-201ENST00000326654 PRM1P04553 51 aa2.45□□□□□ -2.02
ERGIC1-201ENST00000326654 MT1AP04731 61 aa2.44□□□□□ -2.02
ERGIC1-201ENST00000326654 MT4P47944 62 aa2.43□□□□□ -2.02
ERGIC1-201ENST00000326654 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
ERGIC1-201ENST00000326654 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
ERGIC1-201ENST00000326654 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.04
ERGIC1-201ENST00000326654 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
ERGIC1-201ENST00000326654 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
ERGIC1-201ENST00000326654 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
ERGIC1-201ENST00000326654 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
ERGIC1-201ENST00000326654 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
ERGIC1-201ENST00000326654 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
ERGIC1-201ENST00000326654 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
ERGIC1-201ENST00000326654 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
ERGIC1-201ENST00000326654 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
ERGIC1-201ENST00000326654 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
ERGIC1-201ENST00000326654 KRTAP5-1Q6L8H4 278 aa1.86□□□□□ -2.11
ERGIC1-201ENST00000326654 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
ERGIC1-201ENST00000326654 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
ERGIC1-201ENST00000326654 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
ERGIC1-201ENST00000326654 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
ERGIC1-201ENST00000326654 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
ERGIC1-201ENST00000326654 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.14
ERGIC1-201ENST00000326654 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
ERGIC1-201ENST00000326654 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
ERGIC1-201ENST00000326654 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
ERGIC1-201ENST00000326654 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
ERGIC1-201ENST00000326654 PHGR1C9JFL3 82 aa1.28□□□□□ -2.21
ERGIC1-201ENST00000326654 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 102.7 ms