RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 LPAP08519 4548 aa1.9□□□□□ -2.1
SSH1-202ENST00000326495 KRTAP2-3P0C7H8 128 aa1.9□□□□□ -2.1
SSH1-202ENST00000326495 KRTAP2-4Q9BYR9 128 aa1.9□□□□□ -2.1
SSH1-202ENST00000326495 KRTAP2-1Q9BYU5 128 aa1.9□□□□□ -2.1
SSH1-202ENST00000326495 EPPK1P58107 5090 aaKnown RBP1.9□□□□□ -2.11
SSH1-202ENST00000326495 KRTAP19-2Q3LHN2 52 aa1.87□□□□□ -2.11
SSH1-202ENST00000326495 HERC1Q15751 4861 aa1.84□□□□□ -2.11
SSH1-202ENST00000326495 KRTAP4-7Q9BYR0 210 aa1.84□□□□□ -2.12
SSH1-202ENST00000326495 LCE4AQ5TA78 99 aa1.81□□□□□ -2.12
SSH1-202ENST00000326495 MT4P47944 62 aa1.81□□□□□ -2.12
SSH1-202ENST00000326495 HERC2O95714 4834 aa1.81□□□□□ -2.12
SSH1-202ENST00000326495 LCE1DQ5T752 114 aa1.78□□□□□ -2.13
SSH1-202ENST00000326495 LOC100996750A0A140TA64 210 aa1.77□□□□□ -2.13
SSH1-202ENST00000326495 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
SSH1-202ENST00000326495 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
SSH1-202ENST00000326495 KRTAP9-2Q9BYQ4 174 aa1.74□□□□□ -2.13
SSH1-202ENST00000326495 HMCN2Q8NDA2 5059 aa1.74□□□□□ -2.13
SSH1-202ENST00000326495 LCE5AQ5TCM9 118 aa1.72□□□□□ -2.13
SSH1-202ENST00000326495 KRTAP4-3Q9BYR4 195 aa1.7□□□□□ -2.14
SSH1-202ENST00000326495 SYNE1Q8NF91 8797 aaKnown RBP1.69□□□□□ -2.14
SSH1-202ENST00000326495 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
SSH1-202ENST00000326495 KRTAP6-3Q3LI67 103 aa1.67□□□□□ -2.14
SSH1-202ENST00000326495 MDN1Q9NU22 5596 aa1.67□□□□□ -2.14
SSH1-202ENST00000326495 FAT4Q6V0I7 4981 aa1.67□□□□□ -2.14
SSH1-202ENST00000326495 KRTAP9-4Q9BYQ2 154 aa1.67□□□□□ -2.14
SSH1-202ENST00000326495 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
SSH1-202ENST00000326495 FSIP2Q5CZC0 6907 aa1.65□□□□□ -2.14
SSH1-202ENST00000326495 KRTAP20-1Q3LI63 56 aa1.65□□□□□ -2.14
SSH1-202ENST00000326495 MUC2Q02817 5179 aa1.65□□□□□ -2.14
SSH1-202ENST00000326495 KMT2DO14686 5537 aa1.64□□□□□ -2.15
SSH1-202ENST00000326495 KRTAP4-9Q9BYQ8 210 aa1.64□□□□□ -2.15
SSH1-202ENST00000326495 KRTAP6-1Q3LI64 71 aa1.63□□□□□ -2.15
SSH1-202ENST00000326495 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
SSH1-202ENST00000326495 USH2AO75445 5202 aa1.63□□□□□ -2.15
SSH1-202ENST00000326495 KRTAP9-6A0A140TA67 174 aa1.62□□□□□ -2.15
SSH1-202ENST00000326495 KRTAP9-6A8MVA2 160 aa1.62□□□□□ -2.15
SSH1-202ENST00000326495 SYNE2Q8WXH0 6885 aaKnown RBP1.59□□□□□ -2.15
SSH1-202ENST00000326495 KRTAP2-2Q9BYT5 123 aa1.59□□□□□ -2.16
SSH1-202ENST00000326495 MUC12Q9UKN1 5478 aa1.59□□□□□ -2.16
SSH1-202ENST00000326495 KRTAP9-7A8MTY7 169 aa1.57□□□□□ -2.16
SSH1-202ENST00000326495 NEBP20929 6669 aa1.57□□□□□ -2.16
SSH1-202ENST00000326495 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
SSH1-202ENST00000326495 SSPOA2VEC9 5147 aa1.53□□□□□ -2.16
SSH1-202ENST00000326495 KRTAP9-9Q9BYP9 154 aa1.53□□□□□ -2.17
SSH1-202ENST00000326495 LCE1EQ5T753 118 aa1.52□□□□□ -2.17
SSH1-202ENST00000326495 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
SSH1-202ENST00000326495 LCE1FQ5T754 118 aa1.51□□□□□ -2.17
SSH1-202ENST00000326495 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.51□□□□□ -2.17
SSH1-202ENST00000326495 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
SSH1-202ENST00000326495 KRTAP5-9P26371 169 aa1.47□□□□□ -2.17
SSH1-202ENST00000326495 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
SSH1-202ENST00000326495 OBSCNQ5VST9 7968 aa1.43□□□□□ -2.18
SSH1-202ENST00000326495 MACF1Q9UPN3 7388 aaKnown RBP1.41□□□□□ -2.18
SSH1-202ENST00000326495 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.19
SSH1-202ENST00000326495 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
SSH1-202ENST00000326495 KRTAP4-11Q9BYQ6 195 aa1.34□□□□□ -2.19
SSH1-202ENST00000326495 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
SSH1-202ENST00000326495 KRTAP5-4Q6L8H1 288 aa1.32□□□□□ -2.2
SSH1-202ENST00000326495 KRTAP20-2Q3LI61 65 aa1.31□□□□□ -2.2
SSH1-202ENST00000326495 KRTAP4-6Q9BYQ5 205 aa1.28□□□□□ -2.2
SSH1-202ENST00000326495 KRTAP5-5Q701N2 237 aaPredicted RBP1.27□□□□□ -2.21
SSH1-202ENST00000326495 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
SSH1-202ENST00000326495 KRTAP4-12Q9BQ66 201 aa1.21□□□□□ -2.22
SSH1-202ENST00000326495 KRTAP4-4Q9BYR3 166 aa1.17□□□□□ -2.22
SSH1-202ENST00000326495 KRTAP5-3Q6L8H2 238 aa1.16□□□□□ -2.22
SSH1-202ENST00000326495 KRTAP4-2Q9BYR5 136 aa1.13□□□□□ -2.23
SSH1-202ENST00000326495 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.07□□□□□ -2.24
SSH1-202ENST00000326495 KRTAP5-2Q701N4 177 aa1.07□□□□□ -2.24
SSH1-202ENST00000326495 KRTAP5-11Q6L8G4 156 aa1.04□□□□□ -2.24
SSH1-202ENST00000326495 KRTAP5-8O75690 187 aa1.04□□□□□ -2.24
SSH1-202ENST00000326495 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.25
SSH1-202ENST00000326495 KRTAP5-1Q6L8H4 278 aa0.98□□□□□ -2.25
SSH1-202ENST00000326495 KRTAP5-7Q6L8G8 165 aa0.94□□□□□ -2.26
SSH1-202ENST00000326495 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
SSH1-202ENST00000326495 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
SSH1-202ENST00000326495 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
SSH1-202ENST00000326495 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 78.3 ms