RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
ABCF1-201ENST00000326195 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
ABCF1-201ENST00000326195 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
ABCF1-201ENST00000326195 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
ABCF1-201ENST00000326195 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
ABCF1-201ENST00000326195 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
ABCF1-201ENST00000326195 SPRR2EP22531 72 aa3.64□□□□□ -1.83
ABCF1-201ENST00000326195 SPRR2BP35325 72 aa3.64□□□□□ -1.83
ABCF1-201ENST00000326195 SPRR2AP35326 72 aa3.64□□□□□ -1.83
ABCF1-201ENST00000326195 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
ABCF1-201ENST00000326195 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
ABCF1-201ENST00000326195 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
ABCF1-201ENST00000326195 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
ABCF1-201ENST00000326195 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
ABCF1-201ENST00000326195 MT1EP04732 61 aa3.58□□□□□ -1.84
ABCF1-201ENST00000326195 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
ABCF1-201ENST00000326195 KRTAP6-3Q3LI67 103 aa3.55□□□□□ -1.84
ABCF1-201ENST00000326195 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
ABCF1-201ENST00000326195 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
ABCF1-201ENST00000326195 NEBP20929 6669 aa3.5□□□□□ -1.85
ABCF1-201ENST00000326195 MT1LQ93083 61 aa3.49□□□□□ -1.85
ABCF1-201ENST00000326195 SPRR2DP22532 72 aa3.49□□□□□ -1.85
ABCF1-201ENST00000326195 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
ABCF1-201ENST00000326195 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
ABCF1-201ENST00000326195 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
ABCF1-201ENST00000326195 LOC100996750A0A140TA64 210 aa3.41□□□□□ -1.86
ABCF1-201ENST00000326195 MT1GP13640 62 aa3.4□□□□□ -1.86
ABCF1-201ENST00000326195 MT1MQ8N339 61 aa3.4□□□□□ -1.86
ABCF1-201ENST00000326195 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
ABCF1-201ENST00000326195 KRTAP12-4P60329 112 aa3.34□□□□□ -1.88
ABCF1-201ENST00000326195 LCE3BQ5TA77 95 aa3.32□□□□□ -1.88
ABCF1-201ENST00000326195 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
ABCF1-201ENST00000326195 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
ABCF1-201ENST00000326195 MT4P47944 62 aa3.2□□□□□ -1.9
ABCF1-201ENST00000326195 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
ABCF1-201ENST00000326195 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
ABCF1-201ENST00000326195 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
ABCF1-201ENST00000326195 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
ABCF1-201ENST00000326195 PRM1P04553 51 aa3.01□□□□□ -1.93
ABCF1-201ENST00000326195 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
ABCF1-201ENST00000326195 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
ABCF1-201ENST00000326195 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
ABCF1-201ENST00000326195 MT1AP04731 61 aa2.91□□□□□ -1.94
ABCF1-201ENST00000326195 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
ABCF1-201ENST00000326195 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
ABCF1-201ENST00000326195 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
ABCF1-201ENST00000326195 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
ABCF1-201ENST00000326195 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
ABCF1-201ENST00000326195 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
ABCF1-201ENST00000326195 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
ABCF1-201ENST00000326195 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
ABCF1-201ENST00000326195 MT3P25713 68 aa2.71□□□□□ -1.98
ABCF1-201ENST00000326195 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
ABCF1-201ENST00000326195 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
ABCF1-201ENST00000326195 MUC5ACP98088 5654 aa2.57□□□□□ -2
ABCF1-201ENST00000326195 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
ABCF1-201ENST00000326195 KRTAP4-11Q9BYQ6 195 aa2.51□□□□□ -2.01
ABCF1-201ENST00000326195 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
ABCF1-201ENST00000326195 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
ABCF1-201ENST00000326195 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
ABCF1-201ENST00000326195 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
ABCF1-201ENST00000326195 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
ABCF1-201ENST00000326195 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
ABCF1-201ENST00000326195 KRTAP9-9Q9BYP9 154 aa2.24□□□□□ -2.05
ABCF1-201ENST00000326195 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
ABCF1-201ENST00000326195 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
ABCF1-201ENST00000326195 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
ABCF1-201ENST00000326195 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
ABCF1-201ENST00000326195 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
ABCF1-201ENST00000326195 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
ABCF1-201ENST00000326195 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
ABCF1-201ENST00000326195 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
ABCF1-201ENST00000326195 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
ABCF1-201ENST00000326195 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
ABCF1-201ENST00000326195 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
ABCF1-201ENST00000326195 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
ABCF1-201ENST00000326195 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms