RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
EDEM3-201ENST00000318130 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
EDEM3-201ENST00000318130 MT1EP04732 61 aa4.35□□□□□ -1.71
EDEM3-201ENST00000318130 KMT2CQ8NEZ4 4911 aaKnown RBP4.35□□□□□ -1.71
EDEM3-201ENST00000318130 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
EDEM3-201ENST00000318130 PRM1P04553 51 aa4.32□□□□□ -1.72
EDEM3-201ENST00000318130 MT1MQ8N339 61 aa4.28□□□□□ -1.72
EDEM3-201ENST00000318130 KRTAP19-2Q3LHN2 52 aa4.27□□□□□ -1.73
EDEM3-201ENST00000318130 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
EDEM3-201ENST00000318130 PCLOQ9Y6V0 5065 aa4.24□□□□□ -1.73
EDEM3-201ENST00000318130 FSIP2Q5CZC0 6907 aa4.18□□□□□ -1.74
EDEM3-201ENST00000318130 EPPK1P58107 5090 aaKnown RBP4.17□□□□□ -1.74
EDEM3-201ENST00000318130 MT3P25713 68 aa4.15□□□□□ -1.75
EDEM3-201ENST00000318130 SYNE1Q8NF91 8797 aaKnown RBP4.1□□□□□ -1.75
EDEM3-201ENST00000318130 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.75
EDEM3-201ENST00000318130 LCE2AQ5TA79 106 aaPredicted RBP4.08□□□□□ -1.76
EDEM3-201ENST00000318130 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
EDEM3-201ENST00000318130 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
EDEM3-201ENST00000318130 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
EDEM3-201ENST00000318130 LCE1CQ5T751 118 aa4□□□□□ -1.77
EDEM3-201ENST00000318130 LCE1EQ5T753 118 aa4□□□□□ -1.77
EDEM3-201ENST00000318130 LCE1FQ5T754 118 aa4□□□□□ -1.77
EDEM3-201ENST00000318130 LCE1AQ5T7P2 110 aa4□□□□□ -1.77
EDEM3-201ENST00000318130 ABCA13Q86UQ4 5058 aa3.98□□□□□ -1.77
EDEM3-201ENST00000318130 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
EDEM3-201ENST00000318130 MT1AP04731 61 aa3.92□□□□□ -1.78
EDEM3-201ENST00000318130 HMCN2Q8NDA2 5059 aa3.92□□□□□ -1.78
EDEM3-201ENST00000318130 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
EDEM3-201ENST00000318130 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
EDEM3-201ENST00000318130 UBR4Q5T4S7 5183 aa3.87□□□□□ -1.79
EDEM3-201ENST00000318130 FAT4Q6V0I7 4981 aa3.84□□□□□ -1.79
EDEM3-201ENST00000318130 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
EDEM3-201ENST00000318130 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
EDEM3-201ENST00000318130 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
EDEM3-201ENST00000318130 RNF213Q63HN8 5207 aa3.79□□□□□ -1.8
EDEM3-201ENST00000318130 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
EDEM3-201ENST00000318130 MUC2Q02817 5179 aa3.71□□□□□ -1.82
EDEM3-201ENST00000318130 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
EDEM3-201ENST00000318130 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
EDEM3-201ENST00000318130 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
EDEM3-201ENST00000318130 KMT2DO14686 5537 aa3.48□□□□□ -1.85
EDEM3-201ENST00000318130 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
EDEM3-201ENST00000318130 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
EDEM3-201ENST00000318130 USH2AO75445 5202 aa3.38□□□□□ -1.87
EDEM3-201ENST00000318130 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
EDEM3-201ENST00000318130 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
EDEM3-201ENST00000318130 MACF1Q9UPN3 7388 aaKnown RBP3.33□□□□□ -1.88
EDEM3-201ENST00000318130 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
EDEM3-201ENST00000318130 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
EDEM3-201ENST00000318130 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
EDEM3-201ENST00000318130 NEBP20929 6669 aa3.19□□□□□ -1.9
EDEM3-201ENST00000318130 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
EDEM3-201ENST00000318130 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
EDEM3-201ENST00000318130 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
EDEM3-201ENST00000318130 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
EDEM3-201ENST00000318130 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
EDEM3-201ENST00000318130 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
EDEM3-201ENST00000318130 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
EDEM3-201ENST00000318130 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
EDEM3-201ENST00000318130 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
EDEM3-201ENST00000318130 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
EDEM3-201ENST00000318130 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
EDEM3-201ENST00000318130 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
EDEM3-201ENST00000318130 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
EDEM3-201ENST00000318130 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
EDEM3-201ENST00000318130 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
EDEM3-201ENST00000318130 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
EDEM3-201ENST00000318130 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
EDEM3-201ENST00000318130 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
EDEM3-201ENST00000318130 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
EDEM3-201ENST00000318130 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.12
EDEM3-201ENST00000318130 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
EDEM3-201ENST00000318130 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
EDEM3-201ENST00000318130 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
EDEM3-201ENST00000318130 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
EDEM3-201ENST00000318130 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
EDEM3-201ENST00000318130 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 77.9 ms