RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
SERF1A-201ENST00000317633 MT1LQ93083 61 aa7.11□□□□□ -1.27
SERF1A-201ENST00000317633 HMCN1Q96RW7 5635 aa7.08□□□□□ -1.28
SERF1A-201ENST00000317633 SMIM26A0A096LP01 95 aa7.05□□□□□ -1.28
SERF1A-201ENST00000317633 C10orf95Q9H7T3 257 aa7□□□□□ -1.29
SERF1A-201ENST00000317633 TNP1P09430 55 aa6.98□□□□□ -1.29
SERF1A-201ENST00000317633 KRTAP5-4Q6L8H1 288 aa6.98□□□□□ -1.29
SERF1A-201ENST00000317633 A0A1B0GU69 56 aa6.97□□□□□ -1.29
SERF1A-201ENST00000317633 COX7CP15954 63 aa6.97□□□□□ -1.29
SERF1A-201ENST00000317633 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
SERF1A-201ENST00000317633 KRTAP4-3Q9BYR4 195 aa6.96□□□□□ -1.3
SERF1A-201ENST00000317633 AHNAK2Q8IVF2 5795 aa6.93□□□□□ -1.3
SERF1A-201ENST00000317633 H7BZZ5 65 aa6.93□□□□□ -1.3
SERF1A-201ENST00000317633 A8MU10 97 aa6.92□□□□□ -1.3
SERF1A-201ENST00000317633 KRTAP5-10Q6L8G5 202 aa6.87□□□□□ -1.31
SERF1A-201ENST00000317633 KRTAP12-3P60328 96 aa6.73□□□□□ -1.33
SERF1A-201ENST00000317633 PRR15LQ9BU68 103 aa6.71□□□□□ -1.34
SERF1A-201ENST00000317633 KRTAP5-7Q6L8G8 165 aa6.66□□□□□ -1.34
SERF1A-201ENST00000317633 KRTAP20-2Q3LI61 65 aa6.62□□□□□ -1.35
SERF1A-201ENST00000317633 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
SERF1A-201ENST00000317633 KRTAP5-5Q701N2 237 aaPredicted RBP6.58□□□□□ -1.36
SERF1A-201ENST00000317633 ANAPC13Q9BS18 74 aa6.55□□□□□ -1.36
SERF1A-201ENST00000317633 KRTAP12-4P60329 112 aa6.54□□□□□ -1.36
SERF1A-201ENST00000317633 LINC01558Q9Y6Z2 57 aa6.51□□□□□ -1.37
SERF1A-201ENST00000317633 ATP5EP56381 51 aaPredicted RBP6.5□□□□□ -1.37
SERF1A-201ENST00000317633 PCP4P48539 62 aa6.47□□□□□ -1.37
SERF1A-201ENST00000317633 UQCR11O14957 56 aa6.46□□□□□ -1.38
SERF1A-201ENST00000317633 KRTAP25-1Q3LHN0 102 aa6.44□□□□□ -1.38
SERF1A-201ENST00000317633 CCDC179H3BU77 68 aa6.4□□□□□ -1.38
SERF1A-201ENST00000317633 SYNE1Q8NF91 8797 aaKnown RBP6.34□□□□□ -1.39
SERF1A-201ENST00000317633 K7ERS5 55 aa6.27□□□□□ -1.41
SERF1A-201ENST00000317633 MIR22HGQ0VDD5 57 aa6.26□□□□□ -1.41
SERF1A-201ENST00000317633 TMEM258P61165 79 aa6.19□□□□□ -1.42
SERF1A-201ENST00000317633 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
SERF1A-201ENST00000317633 A0A0A0MQY5 61 aa6.06□□□□□ -1.44
SERF1A-201ENST00000317633 MT1AP04731 61 aa6.06□□□□□ -1.44
SERF1A-201ENST00000317633 KRTAP5-2Q701N4 177 aa6.06□□□□□ -1.44
SERF1A-201ENST00000317633 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
SERF1A-201ENST00000317633 V9GYY9 64 aa5.97□□□□□ -1.45
SERF1A-201ENST00000317633 PSPHP1O15172 72 aa5.95□□□□□ -1.46
SERF1A-201ENST00000317633 KRTAP5-8O75690 187 aa5.91□□□□□ -1.46
SERF1A-201ENST00000317633 Q1T7F1 81 aa5.86□□□□□ -1.47
SERF1A-201ENST00000317633 CDC42SE1Q9NRR8 79 aa5.86□□□□□ -1.47
SERF1A-201ENST00000317633 RPS28P62857 69 aaKnown RBP5.82□□□□□ -1.48
SERF1A-201ENST00000317633 KRTAP6-2Q3LI66 62 aa5.82□□□□□ -1.48
SERF1A-201ENST00000317633 KRTAP9-6A8MVA2 160 aa5.77□□□□□ -1.49
SERF1A-201ENST00000317633 A6NED7 52 aa5.76□□□□□ -1.49
SERF1A-201ENST00000317633 AHNAKQ09666 5890 aaKnown RBP5.75□□□□□ -1.49
SERF1A-201ENST00000317633 MUC5BQ9HC84 5762 aaPredicted RBP5.74□□□□□ -1.49
SERF1A-201ENST00000317633 MUC5ACP98088 5654 aa5.73□□□□□ -1.49
SERF1A-201ENST00000317633 ROMO1P60602 79 aa5.73□□□□□ -1.49
SERF1A-201ENST00000317633 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
SERF1A-201ENST00000317633 MT3P25713 68 aa5.59□□□□□ -1.51
SERF1A-201ENST00000317633 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.58□□□□□ -1.52
SERF1A-201ENST00000317633 KRTAP5-1Q6L8H4 278 aa5.48□□□□□ -1.53
SERF1A-201ENST00000317633 KRTAP5-11Q6L8G4 156 aa5.29□□□□□ -1.56
SERF1A-201ENST00000317633 LCE1EQ5T753 118 aa5.26□□□□□ -1.57
SERF1A-201ENST00000317633 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
SERF1A-201ENST00000317633 LCE1FQ5T754 118 aa4.93□□□□□ -1.62
SERF1A-201ENST00000317633 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
SERF1A-201ENST00000317633 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.63
SERF1A-201ENST00000317633 PRO0628Q9UI54 55 aa4.86□□□□□ -1.63
SERF1A-201ENST00000317633 LCE1CQ5T751 118 aa4.81□□□□□ -1.64
SERF1A-201ENST00000317633 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
SERF1A-201ENST00000317633 NDUFAF8A1L188 74 aa4.69□□□□□ -1.66
SERF1A-201ENST00000317633 KRTAP4-4Q9BYR3 166 aa4.62□□□□□ -1.67
SERF1A-201ENST00000317633 KTN1-AS1Q86SY8 53 aa4.44□□□□□ -1.7
SERF1A-201ENST00000317633 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
SERF1A-201ENST00000317633 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
SERF1A-201ENST00000317633 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
SERF1A-201ENST00000317633 PHGR1C9JFL3 82 aa4.04□□□□□ -1.76
SERF1A-201ENST00000317633 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
SERF1A-201ENST00000317633 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
SERF1A-201ENST00000317633 INE1O15225 51 aa3.16□□□□□ -1.9
SERF1A-201ENST00000317633 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
SERF1A-201ENST00000317633 PRM1P04553 51 aa2.89□□□□□ -1.95
SERF1A-201ENST00000317633 MUC16Q8WXI7 14507 aa2.47□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms