RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 KRTAP4-3Q9BYR4 195 aa6.9□□□□□ -1.3
TTC39C-202ENST00000317571 KRTAP2-3P0C7H8 128 aa6.88□□□□□ -1.31
TTC39C-202ENST00000317571 KRTAP2-4Q9BYR9 128 aa6.88□□□□□ -1.31
TTC39C-202ENST00000317571 KRTAP2-1Q9BYU5 128 aa6.88□□□□□ -1.31
TTC39C-202ENST00000317571 LOC100996750A0A140TA64 210 aa6.81□□□□□ -1.32
TTC39C-202ENST00000317571 KRTAP19-3Q7Z4W3 81 aa6.81□□□□□ -1.32
TTC39C-202ENST00000317571 MT1MQ8N339 61 aa6.8□□□□□ -1.32
TTC39C-202ENST00000317571 KRTAP9-2Q9BYQ4 174 aa6.8□□□□□ -1.32
TTC39C-202ENST00000317571 MT1GP13640 62 aa6.74□□□□□ -1.33
TTC39C-202ENST00000317571 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
TTC39C-202ENST00000317571 MACF1Q9UPN3 7388 aaKnown RBP6.65□□□□□ -1.34
TTC39C-202ENST00000317571 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
TTC39C-202ENST00000317571 CRCT1Q9UGL9 99 aa6.54□□□□□ -1.36
TTC39C-202ENST00000317571 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
TTC39C-202ENST00000317571 DSTQ03001 7570 aaKnown RBP6.51□□□□□ -1.37
TTC39C-202ENST00000317571 SYNE2Q8WXH0 6885 aaKnown RBP6.45□□□□□ -1.38
TTC39C-202ENST00000317571 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
TTC39C-202ENST00000317571 KRTAP5-9P26371 169 aa6.3□□□□□ -1.4
TTC39C-202ENST00000317571 LCE1AQ5T7P2 110 aa6.29□□□□□ -1.4
TTC39C-202ENST00000317571 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.43
TTC39C-202ENST00000317571 LCE3BQ5TA77 95 aa6.15□□□□□ -1.43
TTC39C-202ENST00000317571 SPRR2EP22531 72 aa6.11□□□□□ -1.43
TTC39C-202ENST00000317571 SPRR2BP35325 72 aa6.11□□□□□ -1.43
TTC39C-202ENST00000317571 SPRR2AP35326 72 aa6.11□□□□□ -1.43
TTC39C-202ENST00000317571 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
TTC39C-202ENST00000317571 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
TTC39C-202ENST00000317571 MT1AP04731 61 aa6.05□□□□□ -1.44
TTC39C-202ENST00000317571 KRTAP4-9Q9BYQ8 210 aa6.04□□□□□ -1.44
TTC39C-202ENST00000317571 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
TTC39C-202ENST00000317571 KRTAP9-1A8MXZ3 250 aaPredicted RBP6□□□□□ -1.45
TTC39C-202ENST00000317571 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
TTC39C-202ENST00000317571 SPRR2DP22532 72 aa5.85□□□□□ -1.47
TTC39C-202ENST00000317571 KRTAP6-3Q3LI67 103 aa5.83□□□□□ -1.48
TTC39C-202ENST00000317571 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
TTC39C-202ENST00000317571 LCE3DQ9BYE3 92 aa5.68□□□□□ -1.5
TTC39C-202ENST00000317571 LCE3EQ5T5B0 92 aa5.6□□□□□ -1.51
TTC39C-202ENST00000317571 KRTAP6-2Q3LI66 62 aa5.53□□□□□ -1.52
TTC39C-202ENST00000317571 NEBP20929 6669 aa5.47□□□□□ -1.53
TTC39C-202ENST00000317571 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
TTC39C-202ENST00000317571 PRM1P04553 51 aa5.4□□□□□ -1.54
TTC39C-202ENST00000317571 MT3P25713 68 aa5.4□□□□□ -1.54
TTC39C-202ENST00000317571 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
TTC39C-202ENST00000317571 KRTAP4-6Q9BYQ5 205 aa5.26□□□□□ -1.57
TTC39C-202ENST00000317571 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
TTC39C-202ENST00000317571 MT4P47944 62 aa5.17□□□□□ -1.58
TTC39C-202ENST00000317571 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
TTC39C-202ENST00000317571 KRTAP20-2Q3LI61 65 aa5.09□□□□□ -1.59
TTC39C-202ENST00000317571 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
TTC39C-202ENST00000317571 KRTAP5-2Q701N4 177 aa5.05□□□□□ -1.6
TTC39C-202ENST00000317571 HMCN1Q96RW7 5635 aa4.99□□□□□ -1.61
TTC39C-202ENST00000317571 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
TTC39C-202ENST00000317571 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
TTC39C-202ENST00000317571 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
TTC39C-202ENST00000317571 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
TTC39C-202ENST00000317571 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
TTC39C-202ENST00000317571 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
TTC39C-202ENST00000317571 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
TTC39C-202ENST00000317571 KRTAP5-10Q6L8G5 202 aa4.32□□□□□ -1.72
TTC39C-202ENST00000317571 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
TTC39C-202ENST00000317571 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
TTC39C-202ENST00000317571 LCE1CQ5T751 118 aa4.24□□□□□ -1.73
TTC39C-202ENST00000317571 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
TTC39C-202ENST00000317571 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
TTC39C-202ENST00000317571 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
TTC39C-202ENST00000317571 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
TTC39C-202ENST00000317571 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
TTC39C-202ENST00000317571 KRTAP21-2Q3LI59 83 aa3.99□□□□□ -1.77
TTC39C-202ENST00000317571 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
TTC39C-202ENST00000317571 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
TTC39C-202ENST00000317571 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
TTC39C-202ENST00000317571 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
TTC39C-202ENST00000317571 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
TTC39C-202ENST00000317571 KRTAP21-1Q3LI58 79 aa3.39□□□□□ -1.87
TTC39C-202ENST00000317571 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
TTC39C-202ENST00000317571 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
TTC39C-202ENST00000317571 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
TTC39C-202ENST00000317571 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms