RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 LCE1BQ5T7P3 118 aa1.66□□□□□ -2.14
SMCO3-201ENST00000316048 ABCA13Q86UQ4 5058 aa1.66□□□□□ -2.14
SMCO3-201ENST00000316048 NEBP20929 6669 aa1.66□□□□□ -2.14
SMCO3-201ENST00000316048 H0YAA0 97 aa1.66□□□□□ -2.14
SMCO3-201ENST00000316048 KRTAP13-4Q3LI77 160 aa1.66□□□□□ -2.14
SMCO3-201ENST00000316048 KRTAP4-1Q9BYQ7 146 aa1.66□□□□□ -2.14
SMCO3-201ENST00000316048 M0QZ58 72 aa1.64□□□□□ -2.15
SMCO3-201ENST00000316048 LRP2P98164 4655 aa1.64□□□□□ -2.15
SMCO3-201ENST00000316048 LPAP08519 4548 aa1.64□□□□□ -2.15
SMCO3-201ENST00000316048 UBR4Q5T4S7 5183 aa1.63□□□□□ -2.15
SMCO3-201ENST00000316048 A0A0D9SG42 100 aa1.62□□□□□ -2.15
SMCO3-201ENST00000316048 MACF1Q9UPN3 7388 aaKnown RBP1.62□□□□□ -2.15
SMCO3-201ENST00000316048 KRTAP19-2Q3LHN2 52 aa1.61□□□□□ -2.15
SMCO3-201ENST00000316048 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
SMCO3-201ENST00000316048 MUC17Q685J3 4493 aa1.59□□□□□ -2.15
SMCO3-201ENST00000316048 CRIPTQ9P021 101 aa1.58□□□□□ -2.16
SMCO3-201ENST00000316048 M0R2T5 61 aa1.57□□□□□ -2.16
SMCO3-201ENST00000316048 KRTAP12-4P60329 112 aa1.57□□□□□ -2.16
SMCO3-201ENST00000316048 HERC1Q15751 4861 aa1.56□□□□□ -2.16
SMCO3-201ENST00000316048 HMCN2Q8NDA2 5059 aa1.55□□□□□ -2.16
SMCO3-201ENST00000316048 INE1O15225 51 aa1.54□□□□□ -2.16
SMCO3-201ENST00000316048 MT1HP80294 61 aa1.54□□□□□ -2.16
SMCO3-201ENST00000316048 MUC2Q02817 5179 aa1.51□□□□□ -2.17
SMCO3-201ENST00000316048 PLAC4Q8WY50 150 aa1.51□□□□□ -2.17
SMCO3-201ENST00000316048 SPRR2GQ9BYE4 73 aa1.5□□□□□ -2.17
SMCO3-201ENST00000316048 FLGP20930 4061 aaPredicted RBP1.49□□□□□ -2.17
SMCO3-201ENST00000316048 MT2AP02795 61 aa1.49□□□□□ -2.17
SMCO3-201ENST00000316048 C10orf95Q9H7T3 257 aa1.48□□□□□ -2.17
SMCO3-201ENST00000316048 MT1FP04733 61 aa1.48□□□□□ -2.17
SMCO3-201ENST00000316048 RNF213Q63HN8 5207 aa1.46□□□□□ -2.18
SMCO3-201ENST00000316048 TNP1P09430 55 aa1.46□□□□□ -2.18
SMCO3-201ENST00000316048 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
SMCO3-201ENST00000316048 SYNE2Q8WXH0 6885 aaKnown RBP1.46□□□□□ -2.18
SMCO3-201ENST00000316048 KRTAP19-8Q3LI54 63 aa1.45□□□□□ -2.18
SMCO3-201ENST00000316048 FAT4Q6V0I7 4981 aa1.44□□□□□ -2.18
SMCO3-201ENST00000316048 MT1BP07438 61 aa1.41□□□□□ -2.18
SMCO3-201ENST00000316048 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
SMCO3-201ENST00000316048 MT1XP80297 61 aa1.38□□□□□ -2.19
SMCO3-201ENST00000316048 KRTAP8-1Q8IUC2 63 aa1.34□□□□□ -2.2
SMCO3-201ENST00000316048 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
SMCO3-201ENST00000316048 MDN1Q9NU22 5596 aa1.33□□□□□ -2.2
SMCO3-201ENST00000316048 DSTQ03001 7570 aaKnown RBP1.33□□□□□ -2.2
SMCO3-201ENST00000316048 FSIP2Q5CZC0 6907 aa1.33□□□□□ -2.2
SMCO3-201ENST00000316048 KRTAP19-6Q3LI70 58 aa1.29□□□□□ -2.2
SMCO3-201ENST00000316048 KRTAP20-1Q3LI63 56 aa1.27□□□□□ -2.21
SMCO3-201ENST00000316048 KRTAP19-5Q3LI72 72 aa1.27□□□□□ -2.21
SMCO3-201ENST00000316048 SSPOA2VEC9 5147 aa1.26□□□□□ -2.21
SMCO3-201ENST00000316048 USH2AO75445 5202 aa1.26□□□□□ -2.21
SMCO3-201ENST00000316048 KRTAP19-7Q3SYF9 63 aa1.23□□□□□ -2.21
SMCO3-201ENST00000316048 MT1EP04732 61 aa1.21□□□□□ -2.22
SMCO3-201ENST00000316048 KMT2DO14686 5537 aa1.2□□□□□ -2.22
SMCO3-201ENST00000316048 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
SMCO3-201ENST00000316048 MT1LQ93083 61 aa1.19□□□□□ -2.22
SMCO3-201ENST00000316048 MT1GP13640 62 aa1.17□□□□□ -2.22
SMCO3-201ENST00000316048 KRTAP19-3Q7Z4W3 81 aa1.16□□□□□ -2.22
SMCO3-201ENST00000316048 SPRR2FQ96RM1 72 aa1.16□□□□□ -2.22
SMCO3-201ENST00000316048 FCGBPQ9Y6R7 5405 aaPredicted RBP1.15□□□□□ -2.23
SMCO3-201ENST00000316048 MT1MQ8N339 61 aa1.13□□□□□ -2.23
SMCO3-201ENST00000316048 KRTAP2-3P0C7H8 128 aa1.09□□□□□ -2.24
SMCO3-201ENST00000316048 SPRR2EP22531 72 aa1.09□□□□□ -2.24
SMCO3-201ENST00000316048 SPRR2BP35325 72 aa1.09□□□□□ -2.24
SMCO3-201ENST00000316048 SPRR2AP35326 72 aa1.09□□□□□ -2.24
SMCO3-201ENST00000316048 KRTAP2-4Q9BYR9 128 aa1.09□□□□□ -2.24
SMCO3-201ENST00000316048 KRTAP2-1Q9BYU5 128 aa1.09□□□□□ -2.24
SMCO3-201ENST00000316048 MUC12Q9UKN1 5478 aa1.05□□□□□ -2.24
SMCO3-201ENST00000316048 SPRR2DP22532 72 aa1.05□□□□□ -2.24
SMCO3-201ENST00000316048 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
SMCO3-201ENST00000316048 MT1AP04731 61 aa1.02□□□□□ -2.25
SMCO3-201ENST00000316048 KRTAP6-1Q3LI64 71 aa1□□□□□ -2.25
SMCO3-201ENST00000316048 SYNE1Q8NF91 8797 aaKnown RBP0.92□□□□□ -2.26
SMCO3-201ENST00000316048 KRTAP6-2Q3LI66 62 aa0.92□□□□□ -2.26
SMCO3-201ENST00000316048 MT4P47944 62 aa0.9□□□□□ -2.27
SMCO3-201ENST00000316048 KRTAP20-2Q3LI61 65 aa0.88□□□□□ -2.27
SMCO3-201ENST00000316048 PRM1P04553 51 aa0.82□□□□□ -2.28
SMCO3-201ENST00000316048 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
SMCO3-201ENST00000316048 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
SMCO3-201ENST00000316048 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms