RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TNP1P09430 55 aa5.16□□□□□ -1.58
PPP1CA-201ENST00000312989 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
PPP1CA-201ENST00000312989 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
PPP1CA-201ENST00000312989 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
PPP1CA-201ENST00000312989 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
PPP1CA-201ENST00000312989 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
PPP1CA-201ENST00000312989 HMCN1Q96RW7 5635 aa5.07□□□□□ -1.6
PPP1CA-201ENST00000312989 UQCR11O14957 56 aa5.05□□□□□ -1.6
PPP1CA-201ENST00000312989 PSPHP1O15172 72 aa5.04□□□□□ -1.6
PPP1CA-201ENST00000312989 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
PPP1CA-201ENST00000312989 KRTAP12-3P60328 96 aa5□□□□□ -1.61
PPP1CA-201ENST00000312989 KRTAP5-4Q6L8H1 288 aa5□□□□□ -1.61
PPP1CA-201ENST00000312989 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
PPP1CA-201ENST00000312989 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
PPP1CA-201ENST00000312989 SVIPQ8NHG7 77 aa4.97□□□□□ -1.61
PPP1CA-201ENST00000312989 MIR22HGQ0VDD5 57 aa4.95□□□□□ -1.62
PPP1CA-201ENST00000312989 MT4P47944 62 aa4.92□□□□□ -1.62
PPP1CA-201ENST00000312989 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
PPP1CA-201ENST00000312989 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
PPP1CA-201ENST00000312989 A6NED7 52 aa4.88□□□□□ -1.63
PPP1CA-201ENST00000312989 K7ERS5 55 aa4.84□□□□□ -1.63
PPP1CA-201ENST00000312989 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
PPP1CA-201ENST00000312989 CDC42SE1Q9NRR8 79 aa4.78□□□□□ -1.64
PPP1CA-201ENST00000312989 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
PPP1CA-201ENST00000312989 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
PPP1CA-201ENST00000312989 KRTAP5-10Q6L8G5 202 aa4.7□□□□□ -1.66
PPP1CA-201ENST00000312989 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
PPP1CA-201ENST00000312989 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
PPP1CA-201ENST00000312989 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
PPP1CA-201ENST00000312989 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
PPP1CA-201ENST00000312989 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
PPP1CA-201ENST00000312989 BRK1Q8WUW1 75 aa4.59□□□□□ -1.67
PPP1CA-201ENST00000312989 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
PPP1CA-201ENST00000312989 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
PPP1CA-201ENST00000312989 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
PPP1CA-201ENST00000312989 ROMO1P60602 79 aa4.53□□□□□ -1.68
PPP1CA-201ENST00000312989 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
PPP1CA-201ENST00000312989 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
PPP1CA-201ENST00000312989 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
PPP1CA-201ENST00000312989 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
PPP1CA-201ENST00000312989 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
PPP1CA-201ENST00000312989 MT1AP04731 61 aa4.43□□□□□ -1.7
PPP1CA-201ENST00000312989 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
PPP1CA-201ENST00000312989 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
PPP1CA-201ENST00000312989 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
PPP1CA-201ENST00000312989 H3BS24 57 aa4.3□□□□□ -1.72
PPP1CA-201ENST00000312989 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
PPP1CA-201ENST00000312989 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
PPP1CA-201ENST00000312989 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
PPP1CA-201ENST00000312989 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
PPP1CA-201ENST00000312989 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
PPP1CA-201ENST00000312989 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
PPP1CA-201ENST00000312989 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
PPP1CA-201ENST00000312989 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
PPP1CA-201ENST00000312989 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
PPP1CA-201ENST00000312989 MT3P25713 68 aa4□□□□□ -1.77
PPP1CA-201ENST00000312989 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
PPP1CA-201ENST00000312989 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
PPP1CA-201ENST00000312989 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
PPP1CA-201ENST00000312989 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
PPP1CA-201ENST00000312989 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
PPP1CA-201ENST00000312989 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
PPP1CA-201ENST00000312989 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
PPP1CA-201ENST00000312989 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
PPP1CA-201ENST00000312989 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
PPP1CA-201ENST00000312989 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
PPP1CA-201ENST00000312989 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
PPP1CA-201ENST00000312989 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
PPP1CA-201ENST00000312989 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
PPP1CA-201ENST00000312989 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
PPP1CA-201ENST00000312989 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
PPP1CA-201ENST00000312989 INE1O15225 51 aa2.72□□□□□ -1.97
PPP1CA-201ENST00000312989 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
PPP1CA-201ENST00000312989 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
PPP1CA-201ENST00000312989 PRM1P04553 51 aa2.34□□□□□ -2.04
PPP1CA-201ENST00000312989 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
PPP1CA-201ENST00000312989 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms