RNA–Protein interactions for RNA: ENST00000311437.10

ZNF490-201, Transcript of zinc finger protein 490, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF490, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF490-201ENST00000311437 SPRR2DP22532 72 aa2.44□□□□□ -2.02
ZNF490-201ENST00000311437 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
ZNF490-201ENST00000311437 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
ZNF490-201ENST00000311437 KRTAP10-7P60409 375 aaPredicted RBP2.41□□□□□ -2.02
ZNF490-201ENST00000311437 LCE5AQ5TCM9 118 aa2.41□□□□□ -2.02
ZNF490-201ENST00000311437 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.02
ZNF490-201ENST00000311437 USH2AO75445 5202 aa2.4□□□□□ -2.03
ZNF490-201ENST00000311437 MT1XP80297 61 aa2.37□□□□□ -2.03
ZNF490-201ENST00000311437 MT1BP07438 61 aa2.37□□□□□ -2.03
ZNF490-201ENST00000311437 KRTAP2-2Q9BYT5 123 aa2.36□□□□□ -2.03
ZNF490-201ENST00000311437 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
ZNF490-201ENST00000311437 KRTAP19-4Q3LI73 84 aa2.34□□□□□ -2.03
ZNF490-201ENST00000311437 LCE1AQ5T7P2 110 aa2.33□□□□□ -2.04
ZNF490-201ENST00000311437 LOC100996750A0A140TA64 210 aa2.28□□□□□ -2.04
ZNF490-201ENST00000311437 KRTAP4-6Q9BYQ5 205 aa2.28□□□□□ -2.04
ZNF490-201ENST00000311437 LCE3BQ5TA77 95 aa2.27□□□□□ -2.05
ZNF490-201ENST00000311437 SSPOA2VEC9 5147 aa2.27□□□□□ -2.05
ZNF490-201ENST00000311437 KRTAP4-7Q9BYR0 210 aa2.26□□□□□ -2.05
ZNF490-201ENST00000311437 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
ZNF490-201ENST00000311437 KRTAP4-8A0A0G2JLE6 195 aa2.25□□□□□ -2.05
ZNF490-201ENST00000311437 KRTAP4-8Q9BYQ9 185 aa2.25□□□□□ -2.05
ZNF490-201ENST00000311437 SYNE2Q8WXH0 6885 aaKnown RBP2.24□□□□□ -2.05
ZNF490-201ENST00000311437 MT1GP13640 62 aa2.23□□□□□ -2.05
ZNF490-201ENST00000311437 NEBP20929 6669 aa2.21□□□□□ -2.06
ZNF490-201ENST00000311437 KMT2DO14686 5537 aa2.2□□□□□ -2.06
ZNF490-201ENST00000311437 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
ZNF490-201ENST00000311437 FCGBPQ9Y6R7 5405 aaPredicted RBP2.19□□□□□ -2.06
ZNF490-201ENST00000311437 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
ZNF490-201ENST00000311437 KRTAP9-6A8MVA2 160 aa2.18□□□□□ -2.06
ZNF490-201ENST00000311437 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
ZNF490-201ENST00000311437 PRM1P04553 51 aa2.17□□□□□ -2.06
ZNF490-201ENST00000311437 KRTAP19-3Q7Z4W3 81 aa2.16□□□□□ -2.06
ZNF490-201ENST00000311437 DSTQ03001 7570 aaKnown RBP2.14□□□□□ -2.07
ZNF490-201ENST00000311437 MT1LQ93083 61 aa2.14□□□□□ -2.07
ZNF490-201ENST00000311437 MT1EP04732 61 aa2.12□□□□□ -2.07
ZNF490-201ENST00000311437 MACF1Q9UPN3 7388 aaKnown RBP2.11□□□□□ -2.07
ZNF490-201ENST00000311437 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
ZNF490-201ENST00000311437 KRTAP19-7Q3SYF9 63 aa2.05□□□□□ -2.08
ZNF490-201ENST00000311437 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
ZNF490-201ENST00000311437 MUC12Q9UKN1 5478 aa2.05□□□□□ -2.08
ZNF490-201ENST00000311437 MT1MQ8N339 61 aa2.05□□□□□ -2.08
ZNF490-201ENST00000311437 KRTAP4-9Q9BYQ8 210 aa2.04□□□□□ -2.08
ZNF490-201ENST00000311437 KRTAP4-3Q9BYR4 195 aa2.03□□□□□ -2.08
ZNF490-201ENST00000311437 MT4P47944 62 aa2.02□□□□□ -2.09
ZNF490-201ENST00000311437 MT3P25713 68 aa1.95□□□□□ -2.1
ZNF490-201ENST00000311437 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
ZNF490-201ENST00000311437 MT1AP04731 61 aa1.91□□□□□ -2.1
ZNF490-201ENST00000311437 KRTAP6-2Q3LI66 62 aa1.9□□□□□ -2.1
ZNF490-201ENST00000311437 KRTAP4-2Q9BYR5 136 aa1.89□□□□□ -2.11
ZNF490-201ENST00000311437 LCE1DQ5T752 114 aa1.87□□□□□ -2.11
ZNF490-201ENST00000311437 KRTAP4-11Q9BYQ6 195 aa1.83□□□□□ -2.12
ZNF490-201ENST00000311437 LCE1BQ5T7P3 118 aa1.82□□□□□ -2.12
ZNF490-201ENST00000311437 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
ZNF490-201ENST00000311437 LCE1EQ5T753 118 aa1.82□□□□□ -2.12
ZNF490-201ENST00000311437 KRTAP5-4Q6L8H1 288 aa1.8□□□□□ -2.12
ZNF490-201ENST00000311437 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
ZNF490-201ENST00000311437 KRTAP5-3Q6L8H2 238 aa1.74□□□□□ -2.13
ZNF490-201ENST00000311437 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
ZNF490-201ENST00000311437 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
ZNF490-201ENST00000311437 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
ZNF490-201ENST00000311437 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
ZNF490-201ENST00000311437 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
ZNF490-201ENST00000311437 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
ZNF490-201ENST00000311437 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
ZNF490-201ENST00000311437 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
ZNF490-201ENST00000311437 KRTAP5-8O75690 187 aa1.46□□□□□ -2.18
ZNF490-201ENST00000311437 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.18
ZNF490-201ENST00000311437 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
ZNF490-201ENST00000311437 KRTAP5-2Q701N4 177 aa1.43□□□□□ -2.18
ZNF490-201ENST00000311437 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
ZNF490-201ENST00000311437 KRTAP5-1Q6L8H4 278 aa1.38□□□□□ -2.19
ZNF490-201ENST00000311437 KRTAP4-4Q9BYR3 166 aa1.27□□□□□ -2.21
ZNF490-201ENST00000311437 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.26□□□□□ -2.21
ZNF490-201ENST00000311437 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
ZNF490-201ENST00000311437 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
ZNF490-201ENST00000311437 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
ZNF490-201ENST00000311437 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms