RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.39
SPSB4-201ENST00000310546 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
SPSB4-201ENST00000310546 MACF1Q9UPN3 7388 aaKnown RBP6.24□□□□□ -1.41
SPSB4-201ENST00000310546 SYNE2Q8WXH0 6885 aaKnown RBP6.24□□□□□ -1.41
SPSB4-201ENST00000310546 DSTQ03001 7570 aaKnown RBP6.14□□□□□ -1.43
SPSB4-201ENST00000310546 KRTAP19-7Q3SYF9 63 aa6.07□□□□□ -1.44
SPSB4-201ENST00000310546 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
SPSB4-201ENST00000310546 KRTAP12-4P60329 112 aa5.93□□□□□ -1.46
SPSB4-201ENST00000310546 MT1LQ93083 61 aa5.93□□□□□ -1.46
SPSB4-201ENST00000310546 MDN1Q9NU22 5596 aa5.93□□□□□ -1.46
SPSB4-201ENST00000310546 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
SPSB4-201ENST00000310546 MT1EP04732 61 aa5.88□□□□□ -1.47
SPSB4-201ENST00000310546 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
SPSB4-201ENST00000310546 SPRR2FQ96RM1 72 aa5.84□□□□□ -1.48
SPSB4-201ENST00000310546 SYNE1Q8NF91 8797 aaKnown RBP5.82□□□□□ -1.48
SPSB4-201ENST00000310546 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
SPSB4-201ENST00000310546 KRTAP9-7A8MTY7 169 aa5.76□□□□□ -1.49
SPSB4-201ENST00000310546 KRTAP6-3Q3LI67 103 aa5.75□□□□□ -1.49
SPSB4-201ENST00000310546 KRTAP5-9P26371 169 aa5.72□□□□□ -1.49
SPSB4-201ENST00000310546 MT1GP13640 62 aa5.72□□□□□ -1.49
SPSB4-201ENST00000310546 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.49
SPSB4-201ENST00000310546 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
SPSB4-201ENST00000310546 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
SPSB4-201ENST00000310546 MT1MQ8N339 61 aa5.52□□□□□ -1.53
SPSB4-201ENST00000310546 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
SPSB4-201ENST00000310546 SPRR2EP22531 72 aa5.48□□□□□ -1.53
SPSB4-201ENST00000310546 SPRR2BP35325 72 aa5.48□□□□□ -1.53
SPSB4-201ENST00000310546 SPRR2AP35326 72 aa5.48□□□□□ -1.53
SPSB4-201ENST00000310546 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
SPSB4-201ENST00000310546 NEBP20929 6669 aa5.46□□□□□ -1.54
SPSB4-201ENST00000310546 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
SPSB4-201ENST00000310546 PRM1P04553 51 aa5.32□□□□□ -1.56
SPSB4-201ENST00000310546 SPRR2DP22532 72 aa5.29□□□□□ -1.56
SPSB4-201ENST00000310546 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
SPSB4-201ENST00000310546 LCE3EQ5T5B0 92 aa5.21□□□□□ -1.58
SPSB4-201ENST00000310546 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
SPSB4-201ENST00000310546 MT1AP04731 61 aa5.2□□□□□ -1.58
SPSB4-201ENST00000310546 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
SPSB4-201ENST00000310546 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
SPSB4-201ENST00000310546 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
SPSB4-201ENST00000310546 KRTAP2-2Q9BYT5 123 aa4.95□□□□□ -1.62
SPSB4-201ENST00000310546 MT4P47944 62 aa4.73□□□□□ -1.65
SPSB4-201ENST00000310546 KRTAP5-4Q6L8H1 288 aa4.72□□□□□ -1.65
SPSB4-201ENST00000310546 LCE4AQ5TA78 99 aa4.66□□□□□ -1.66
SPSB4-201ENST00000310546 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
SPSB4-201ENST00000310546 KRTAP4-6Q9BYQ5 205 aa4.63□□□□□ -1.67
SPSB4-201ENST00000310546 LCE1DQ5T752 114 aa4.59□□□□□ -1.68
SPSB4-201ENST00000310546 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
SPSB4-201ENST00000310546 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
SPSB4-201ENST00000310546 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
SPSB4-201ENST00000310546 MT3P25713 68 aa4.41□□□□□ -1.7
SPSB4-201ENST00000310546 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
SPSB4-201ENST00000310546 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
SPSB4-201ENST00000310546 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
SPSB4-201ENST00000310546 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
SPSB4-201ENST00000310546 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
SPSB4-201ENST00000310546 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
SPSB4-201ENST00000310546 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
SPSB4-201ENST00000310546 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
SPSB4-201ENST00000310546 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
SPSB4-201ENST00000310546 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
SPSB4-201ENST00000310546 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.81
SPSB4-201ENST00000310546 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
SPSB4-201ENST00000310546 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
SPSB4-201ENST00000310546 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
SPSB4-201ENST00000310546 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
SPSB4-201ENST00000310546 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
SPSB4-201ENST00000310546 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
SPSB4-201ENST00000310546 KRTAP21-1Q3LI58 79 aa3.3□□□□□ -1.88
SPSB4-201ENST00000310546 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
SPSB4-201ENST00000310546 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
SPSB4-201ENST00000310546 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
SPSB4-201ENST00000310546 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
SPSB4-201ENST00000310546 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
SPSB4-201ENST00000310546 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
SPSB4-201ENST00000310546 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
SPSB4-201ENST00000310546 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 227.9 ms