RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
CCS-201ENST00000310190 KRTAP25-1Q3LHN0 102 aa6.45□□□□□ -1.38
CCS-201ENST00000310190 MT1GP13640 62 aa6.43□□□□□ -1.38
CCS-201ENST00000310190 LCE3BQ5TA77 95 aa6.42□□□□□ -1.38
CCS-201ENST00000310190 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
CCS-201ENST00000310190 MT1LQ93083 61 aa6.37□□□□□ -1.39
CCS-201ENST00000310190 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
CCS-201ENST00000310190 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
CCS-201ENST00000310190 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
CCS-201ENST00000310190 MT1MQ8N339 61 aa6.28□□□□□ -1.4
CCS-201ENST00000310190 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
CCS-201ENST00000310190 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
CCS-201ENST00000310190 ROMO1P60602 79 aa6.16□□□□□ -1.42
CCS-201ENST00000310190 BRK1Q8WUW1 75 aa6.13□□□□□ -1.43
CCS-201ENST00000310190 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
CCS-201ENST00000310190 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
CCS-201ENST00000310190 KRTAP15-1Q3LI76 137 aa5.98□□□□□ -1.45
CCS-201ENST00000310190 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
CCS-201ENST00000310190 LCE4AQ5TA78 99 aa5.95□□□□□ -1.46
CCS-201ENST00000310190 KRTAP5-4Q6L8H1 288 aa5.93□□□□□ -1.46
CCS-201ENST00000310190 HMCN1Q96RW7 5635 aa5.91□□□□□ -1.46
CCS-201ENST00000310190 AHNAK2Q8IVF2 5795 aa5.86□□□□□ -1.47
CCS-201ENST00000310190 LCE1DQ5T752 114 aa5.86□□□□□ -1.47
CCS-201ENST00000310190 LCE3CQ5T5A8 94 aa5.84□□□□□ -1.47
CCS-201ENST00000310190 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
CCS-201ENST00000310190 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
CCS-201ENST00000310190 MT4P47944 62 aa5.74□□□□□ -1.49
CCS-201ENST00000310190 KRTAP5-10Q6L8G5 202 aa5.72□□□□□ -1.49
CCS-201ENST00000310190 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
CCS-201ENST00000310190 PRO0628Q9UI54 55 aa5.65□□□□□ -1.5
CCS-201ENST00000310190 KRTAP4-6Q9BYQ5 205 aa5.63□□□□□ -1.51
CCS-201ENST00000310190 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
CCS-201ENST00000310190 KRTAP5-7Q6L8G8 165 aa5.55□□□□□ -1.52
CCS-201ENST00000310190 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
CCS-201ENST00000310190 KRTAP20-2Q3LI61 65 aa5.51□□□□□ -1.53
CCS-201ENST00000310190 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
CCS-201ENST00000310190 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
CCS-201ENST00000310190 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
CCS-201ENST00000310190 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
CCS-201ENST00000310190 MT1AP04731 61 aa5.44□□□□□ -1.54
CCS-201ENST00000310190 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
CCS-201ENST00000310190 KTN1-AS1Q86SY8 53 aa5.33□□□□□ -1.56
CCS-201ENST00000310190 KRTAP5-2Q701N4 177 aa5.25□□□□□ -1.57
CCS-201ENST00000310190 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
CCS-201ENST00000310190 SVIPQ8NHG7 77 aa5.17□□□□□ -1.58
CCS-201ENST00000310190 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
CCS-201ENST00000310190 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
CCS-201ENST00000310190 AHNAKQ09666 5890 aaKnown RBP4.97□□□□□ -1.61
CCS-201ENST00000310190 MT3P25713 68 aa4.96□□□□□ -1.62
CCS-201ENST00000310190 MUC5BQ9HC84 5762 aaPredicted RBP4.91□□□□□ -1.62
CCS-201ENST00000310190 MUC5ACP98088 5654 aa4.9□□□□□ -1.63
CCS-201ENST00000310190 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
CCS-201ENST00000310190 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
CCS-201ENST00000310190 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
CCS-201ENST00000310190 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
CCS-201ENST00000310190 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
CCS-201ENST00000310190 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
CCS-201ENST00000310190 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
CCS-201ENST00000310190 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
CCS-201ENST00000310190 LCE1CQ5T751 118 aa4.24□□□□□ -1.73
CCS-201ENST00000310190 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
CCS-201ENST00000310190 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
CCS-201ENST00000310190 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
CCS-201ENST00000310190 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
CCS-201ENST00000310190 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
CCS-201ENST00000310190 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
CCS-201ENST00000310190 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
CCS-201ENST00000310190 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
CCS-201ENST00000310190 H3BS24 57 aa3.57□□□□□ -1.84
CCS-201ENST00000310190 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
CCS-201ENST00000310190 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
CCS-201ENST00000310190 INE1O15225 51 aa3.29□□□□□ -1.88
CCS-201ENST00000310190 PRM1P04553 51 aa3.19□□□□□ -1.9
CCS-201ENST00000310190 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
CCS-201ENST00000310190 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
CCS-201ENST00000310190 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
CCS-201ENST00000310190 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms