RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
PGAP3-202ENST00000309862 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
PGAP3-202ENST00000309862 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
PGAP3-202ENST00000309862 FCGBPQ9Y6R7 5405 aaPredicted RBP5.04□□□□□ -1.6
PGAP3-202ENST00000309862 MT1GP13640 62 aa5.04□□□□□ -1.6
PGAP3-202ENST00000309862 DSTQ03001 7570 aaKnown RBP5.03□□□□□ -1.6
PGAP3-202ENST00000309862 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
PGAP3-202ENST00000309862 LCE2DQ5TA82 110 aaPredicted RBP4.91□□□□□ -1.62
PGAP3-202ENST00000309862 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
PGAP3-202ENST00000309862 MT1MQ8N339 61 aa4.86□□□□□ -1.63
PGAP3-202ENST00000309862 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
PGAP3-202ENST00000309862 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
PGAP3-202ENST00000309862 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
PGAP3-202ENST00000309862 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
PGAP3-202ENST00000309862 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
PGAP3-202ENST00000309862 SPRR2FQ96RM1 72 aa4.71□□□□□ -1.66
PGAP3-202ENST00000309862 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
PGAP3-202ENST00000309862 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.67
PGAP3-202ENST00000309862 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
PGAP3-202ENST00000309862 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
PGAP3-202ENST00000309862 MDN1Q9NU22 5596 aa4.52□□□□□ -1.69
PGAP3-202ENST00000309862 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
PGAP3-202ENST00000309862 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
PGAP3-202ENST00000309862 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
PGAP3-202ENST00000309862 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
PGAP3-202ENST00000309862 MT1AP04731 61 aa4.41□□□□□ -1.7
PGAP3-202ENST00000309862 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
PGAP3-202ENST00000309862 PRM1P04553 51 aa4.36□□□□□ -1.71
PGAP3-202ENST00000309862 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
PGAP3-202ENST00000309862 SPRR2EP22531 72 aa4.24□□□□□ -1.73
PGAP3-202ENST00000309862 SPRR2BP35325 72 aa4.24□□□□□ -1.73
PGAP3-202ENST00000309862 SPRR2AP35326 72 aa4.24□□□□□ -1.73
PGAP3-202ENST00000309862 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
PGAP3-202ENST00000309862 KRTAP9-6A0A140TA67 174 aa4.21□□□□□ -1.73
PGAP3-202ENST00000309862 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
PGAP3-202ENST00000309862 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
PGAP3-202ENST00000309862 SPRR2DP22532 72 aa4.03□□□□□ -1.76
PGAP3-202ENST00000309862 KRTAP5-9P26371 169 aa4.03□□□□□ -1.77
PGAP3-202ENST00000309862 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.96□□□□□ -1.78
PGAP3-202ENST00000309862 MT3P25713 68 aa3.91□□□□□ -1.78
PGAP3-202ENST00000309862 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
PGAP3-202ENST00000309862 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
PGAP3-202ENST00000309862 MT4P47944 62 aa3.72□□□□□ -1.81
PGAP3-202ENST00000309862 KRTAP4-6Q9BYQ5 205 aa3.65□□□□□ -1.83
PGAP3-202ENST00000309862 NEBP20929 6669 aa3.64□□□□□ -1.83
PGAP3-202ENST00000309862 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
PGAP3-202ENST00000309862 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
PGAP3-202ENST00000309862 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
PGAP3-202ENST00000309862 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
PGAP3-202ENST00000309862 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
PGAP3-202ENST00000309862 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
PGAP3-202ENST00000309862 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
PGAP3-202ENST00000309862 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.87
PGAP3-202ENST00000309862 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.88
PGAP3-202ENST00000309862 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
PGAP3-202ENST00000309862 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
PGAP3-202ENST00000309862 LCE4AQ5TA78 99 aa3.26□□□□□ -1.89
PGAP3-202ENST00000309862 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
PGAP3-202ENST00000309862 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
PGAP3-202ENST00000309862 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
PGAP3-202ENST00000309862 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
PGAP3-202ENST00000309862 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
PGAP3-202ENST00000309862 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
PGAP3-202ENST00000309862 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.94
PGAP3-202ENST00000309862 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
PGAP3-202ENST00000309862 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
PGAP3-202ENST00000309862 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
PGAP3-202ENST00000309862 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
PGAP3-202ENST00000309862 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
PGAP3-202ENST00000309862 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
PGAP3-202ENST00000309862 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
PGAP3-202ENST00000309862 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
PGAP3-202ENST00000309862 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
PGAP3-202ENST00000309862 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
PGAP3-202ENST00000309862 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
PGAP3-202ENST00000309862 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
PGAP3-202ENST00000309862 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
PGAP3-202ENST00000309862 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 68.2 ms