RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 KRTAP2-3P0C7H8 128 aa7.04□□□□□ -1.28
RELA-201ENST00000308639 KRTAP2-4Q9BYR9 128 aa7.04□□□□□ -1.28
RELA-201ENST00000308639 KRTAP2-1Q9BYU5 128 aa7.04□□□□□ -1.28
RELA-201ENST00000308639 KRTAP4-3Q9BYR4 195 aa7.01□□□□□ -1.29
RELA-201ENST00000308639 LOC100996750A0A140TA64 210 aa6.96□□□□□ -1.3
RELA-201ENST00000308639 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
RELA-201ENST00000308639 MT1GP13640 62 aa6.83□□□□□ -1.32
RELA-201ENST00000308639 DSTQ03001 7570 aaKnown RBP6.81□□□□□ -1.32
RELA-201ENST00000308639 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
RELA-201ENST00000308639 MT1MQ8N339 61 aa6.74□□□□□ -1.33
RELA-201ENST00000308639 MACF1Q9UPN3 7388 aaKnown RBP6.73□□□□□ -1.33
RELA-201ENST00000308639 KRTAP19-3Q7Z4W3 81 aa6.71□□□□□ -1.34
RELA-201ENST00000308639 SYNE2Q8WXH0 6885 aaKnown RBP6.62□□□□□ -1.35
RELA-201ENST00000308639 SPRR2FQ96RM1 72 aa6.54□□□□□ -1.36
RELA-201ENST00000308639 LCE5AQ5TCM9 118 aa6.47□□□□□ -1.37
RELA-201ENST00000308639 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
RELA-201ENST00000308639 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
RELA-201ENST00000308639 KRTAP12-4P60329 112 aa6.36□□□□□ -1.39
RELA-201ENST00000308639 SYNE1Q8NF91 8797 aaKnown RBP6.36□□□□□ -1.39
RELA-201ENST00000308639 LCE3BQ5TA77 95 aa6.33□□□□□ -1.4
RELA-201ENST00000308639 KRTAP4-9Q9BYQ8 210 aa6.29□□□□□ -1.4
RELA-201ENST00000308639 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.27□□□□□ -1.41
RELA-201ENST00000308639 KRTAP5-9P26371 169 aa6.18□□□□□ -1.42
RELA-201ENST00000308639 KRTAP6-1Q3LI64 71 aa6.18□□□□□ -1.42
RELA-201ENST00000308639 LCE1AQ5T7P2 110 aa6.09□□□□□ -1.43
RELA-201ENST00000308639 SPRR2EP22531 72 aa6.07□□□□□ -1.44
RELA-201ENST00000308639 SPRR2BP35325 72 aa6.07□□□□□ -1.44
RELA-201ENST00000308639 SPRR2AP35326 72 aa6.07□□□□□ -1.44
RELA-201ENST00000308639 KRTAP6-3Q3LI67 103 aa6.05□□□□□ -1.44
RELA-201ENST00000308639 MT1AP04731 61 aa6□□□□□ -1.45
RELA-201ENST00000308639 KRTAP9-7A8MTY7 169 aa5.91□□□□□ -1.46
RELA-201ENST00000308639 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
RELA-201ENST00000308639 LCE3DQ9BYE3 92 aa5.86□□□□□ -1.47
RELA-201ENST00000308639 OBSCNQ5VST9 7968 aa5.86□□□□□ -1.47
RELA-201ENST00000308639 SPRR2DP22532 72 aa5.83□□□□□ -1.48
RELA-201ENST00000308639 LCE3EQ5T5B0 92 aa5.77□□□□□ -1.49
RELA-201ENST00000308639 NEBP20929 6669 aa5.75□□□□□ -1.49
RELA-201ENST00000308639 PRM1P04553 51 aa5.72□□□□□ -1.49
RELA-201ENST00000308639 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.51
RELA-201ENST00000308639 KRTAP6-2Q3LI66 62 aa5.54□□□□□ -1.52
RELA-201ENST00000308639 MT3P25713 68 aa5.37□□□□□ -1.55
RELA-201ENST00000308639 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
RELA-201ENST00000308639 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
RELA-201ENST00000308639 MT4P47944 62 aa5.17□□□□□ -1.58
RELA-201ENST00000308639 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
RELA-201ENST00000308639 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
RELA-201ENST00000308639 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
RELA-201ENST00000308639 HMCN1Q96RW7 5635 aa5.01□□□□□ -1.61
RELA-201ENST00000308639 LCE1DQ5T752 114 aa4.99□□□□□ -1.61
RELA-201ENST00000308639 KRTAP20-2Q3LI61 65 aa4.91□□□□□ -1.62
RELA-201ENST00000308639 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
RELA-201ENST00000308639 KRTAP5-2Q701N4 177 aa4.8□□□□□ -1.64
RELA-201ENST00000308639 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
RELA-201ENST00000308639 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
RELA-201ENST00000308639 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
RELA-201ENST00000308639 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
RELA-201ENST00000308639 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
RELA-201ENST00000308639 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
RELA-201ENST00000308639 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
RELA-201ENST00000308639 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
RELA-201ENST00000308639 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
RELA-201ENST00000308639 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
RELA-201ENST00000308639 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
RELA-201ENST00000308639 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
RELA-201ENST00000308639 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
RELA-201ENST00000308639 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
RELA-201ENST00000308639 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
RELA-201ENST00000308639 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
RELA-201ENST00000308639 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
RELA-201ENST00000308639 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
RELA-201ENST00000308639 KRTAP21-1Q3LI58 79 aa3.66□□□□□ -1.82
RELA-201ENST00000308639 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
RELA-201ENST00000308639 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
RELA-201ENST00000308639 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
RELA-201ENST00000308639 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
RELA-201ENST00000308639 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
RELA-201ENST00000308639 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms