RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 KRTAP9-6A8MVA2 160 aa2.21□□□□□ -2.06
RSF1-201ENST00000308488 KRTAP9-2Q9BYQ4 174 aa2.2□□□□□ -2.06
RSF1-201ENST00000308488 KRTAP2-2Q9BYT5 123 aa2.2□□□□□ -2.06
RSF1-201ENST00000308488 ABCA13Q86UQ4 5058 aa2.19□□□□□ -2.06
RSF1-201ENST00000308488 LCE2BO14633 110 aa2.19□□□□□ -2.06
RSF1-201ENST00000308488 SPRR2DP22532 72 aa2.18□□□□□ -2.06
RSF1-201ENST00000308488 LOC100996750A0A140TA64 210 aa2.18□□□□□ -2.06
RSF1-201ENST00000308488 KRTAP9-7A8MTY7 169 aa2.18□□□□□ -2.06
RSF1-201ENST00000308488 EPPK1P58107 5090 aaKnown RBP2.17□□□□□ -2.06
RSF1-201ENST00000308488 KRTAP19-2Q3LHN2 52 aa2.17□□□□□ -2.06
RSF1-201ENST00000308488 LCE1AQ5T7P2 110 aa2.16□□□□□ -2.06
RSF1-201ENST00000308488 KRTAP4-9Q9BYQ8 210 aa2.13□□□□□ -2.07
RSF1-201ENST00000308488 KRTAP19-7Q3SYF9 63 aa2.12□□□□□ -2.07
RSF1-201ENST00000308488 LPAP08519 4548 aa2.12□□□□□ -2.07
RSF1-201ENST00000308488 LCE2AQ5TA79 106 aaPredicted RBP2.12□□□□□ -2.07
RSF1-201ENST00000308488 RNF213Q63HN8 5207 aa2.11□□□□□ -2.07
RSF1-201ENST00000308488 SPRR2EP22531 72 aa2.11□□□□□ -2.07
RSF1-201ENST00000308488 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
RSF1-201ENST00000308488 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
RSF1-201ENST00000308488 LCE1EQ5T753 118 aa2.04□□□□□ -2.08
RSF1-201ENST00000308488 KIAA1109Q2LD37 5005 aa1.98□□□□□ -2.09
RSF1-201ENST00000308488 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
RSF1-201ENST00000308488 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
RSF1-201ENST00000308488 LCE1DQ5T752 114 aa1.96□□□□□ -2.1
RSF1-201ENST00000308488 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
RSF1-201ENST00000308488 KRTAP17-1Q9BYP8 105 aa1.94□□□□□ -2.1
RSF1-201ENST00000308488 LCE4AQ5TA78 99 aa1.92□□□□□ -2.1
RSF1-201ENST00000308488 KRTAP9-4Q9BYQ2 154 aa1.9□□□□□ -2.1
RSF1-201ENST00000308488 KRTAP5-5Q701N2 237 aaPredicted RBP1.87□□□□□ -2.11
RSF1-201ENST00000308488 LCE5AQ5TCM9 118 aa1.86□□□□□ -2.11
RSF1-201ENST00000308488 FAT4Q6V0I7 4981 aa1.84□□□□□ -2.11
RSF1-201ENST00000308488 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
RSF1-201ENST00000308488 KMT2DO14686 5537 aa1.83□□□□□ -2.12
RSF1-201ENST00000308488 MT4P47944 62 aa1.83□□□□□ -2.12
RSF1-201ENST00000308488 KRTAP19-6Q3LI70 58 aa1.82□□□□□ -2.12
RSF1-201ENST00000308488 USH2AO75445 5202 aa1.81□□□□□ -2.12
RSF1-201ENST00000308488 KRTAP4-11Q9BYQ6 195 aa1.8□□□□□ -2.12
RSF1-201ENST00000308488 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
RSF1-201ENST00000308488 FCGBPQ9Y6R7 5405 aaPredicted RBP1.75□□□□□ -2.13
RSF1-201ENST00000308488 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
RSF1-201ENST00000308488 MUC2Q02817 5179 aa1.71□□□□□ -2.14
RSF1-201ENST00000308488 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
RSF1-201ENST00000308488 SYNE2Q8WXH0 6885 aaKnown RBP1.69□□□□□ -2.14
RSF1-201ENST00000308488 SSPOA2VEC9 5147 aa1.68□□□□□ -2.14
RSF1-201ENST00000308488 OBSCNQ5VST9 7968 aa1.61□□□□□ -2.15
RSF1-201ENST00000308488 FSIP2Q5CZC0 6907 aa1.47□□□□□ -2.17
RSF1-201ENST00000308488 KRTAP20-2Q3LI61 65 aa1.44□□□□□ -2.18
RSF1-201ENST00000308488 DSTQ03001 7570 aaKnown RBP1.44□□□□□ -2.18
RSF1-201ENST00000308488 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
RSF1-201ENST00000308488 NEBP20929 6669 aa1.4□□□□□ -2.18
RSF1-201ENST00000308488 KRTAP4-4Q9BYR3 166 aa1.38□□□□□ -2.19
RSF1-201ENST00000308488 KRTAP9-9Q9BYP9 154 aa1.38□□□□□ -2.19
RSF1-201ENST00000308488 KRTAP20-1Q3LI63 56 aa1.34□□□□□ -2.2
RSF1-201ENST00000308488 KRTAP4-12Q9BQ66 201 aa1.33□□□□□ -2.2
RSF1-201ENST00000308488 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
RSF1-201ENST00000308488 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
RSF1-201ENST00000308488 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
RSF1-201ENST00000308488 KRTAP5-4Q6L8H1 288 aa1.3□□□□□ -2.2
RSF1-201ENST00000308488 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
RSF1-201ENST00000308488 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
RSF1-201ENST00000308488 AHNAK2Q8IVF2 5795 aa1.26□□□□□ -2.21
RSF1-201ENST00000308488 KRTAP5-9P26371 169 aa1.26□□□□□ -2.21
RSF1-201ENST00000308488 KRTAP5-2Q701N4 177 aa1.26□□□□□ -2.21
RSF1-201ENST00000308488 KRTAP4-6Q9BYQ5 205 aa1.24□□□□□ -2.21
RSF1-201ENST00000308488 MACF1Q9UPN3 7388 aaKnown RBP1.23□□□□□ -2.21
RSF1-201ENST00000308488 KRTAP4-2Q9BYR5 136 aa1.22□□□□□ -2.21
RSF1-201ENST00000308488 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.22□□□□□ -2.21
RSF1-201ENST00000308488 KRTAP5-1Q6L8H4 278 aa1.06□□□□□ -2.24
RSF1-201ENST00000308488 KRTAP5-3Q6L8H2 238 aa1.05□□□□□ -2.24
RSF1-201ENST00000308488 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
RSF1-201ENST00000308488 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
RSF1-201ENST00000308488 KRTAP5-11Q6L8G4 156 aa0.98□□□□□ -2.25
RSF1-201ENST00000308488 KRTAP5-8O75690 187 aa0.97□□□□□ -2.25
RSF1-201ENST00000308488 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.96□□□□□ -2.26
RSF1-201ENST00000308488 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
RSF1-201ENST00000308488 KRTAP5-7Q6L8G8 165 aa0.78□□□□□ -2.29
RSF1-201ENST00000308488 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 74.9 ms