RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 TNP1P09430 55 aa2.3□□□□□ -2.04
TTC39C-201ENST00000304621 KRTAP2-2Q9BYT5 123 aa2.3□□□□□ -2.04
TTC39C-201ENST00000304621 MT3P25713 68 aa2.28□□□□□ -2.04
TTC39C-201ENST00000304621 PP632Q6XCG6 107 aa2.28□□□□□ -2.05
TTC39C-201ENST00000304621 SSPOA2VEC9 5147 aa2.27□□□□□ -2.05
TTC39C-201ENST00000304621 KRTAP10-12P60413 245 aa2.26□□□□□ -2.05
TTC39C-201ENST00000304621 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
TTC39C-201ENST00000304621 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
TTC39C-201ENST00000304621 FCGBPQ9Y6R7 5405 aaPredicted RBP2.19□□□□□ -2.06
TTC39C-201ENST00000304621 KRTAP8-1Q8IUC2 63 aa2.19□□□□□ -2.06
TTC39C-201ENST00000304621 FSIP2Q5CZC0 6907 aa2.19□□□□□ -2.06
TTC39C-201ENST00000304621 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
TTC39C-201ENST00000304621 KRTAP19-7Q3SYF9 63 aa2.16□□□□□ -2.06
TTC39C-201ENST00000304621 KRTAP12-3P60328 96 aa2.14□□□□□ -2.07
TTC39C-201ENST00000304621 KMT2DO14686 5537 aa2.14□□□□□ -2.07
TTC39C-201ENST00000304621 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
TTC39C-201ENST00000304621 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
TTC39C-201ENST00000304621 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
TTC39C-201ENST00000304621 MT1EP04732 61 aa2.11□□□□□ -2.07
TTC39C-201ENST00000304621 KRTAP5-9P26371 169 aa2.08□□□□□ -2.08
TTC39C-201ENST00000304621 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
TTC39C-201ENST00000304621 MT1LQ93083 61 aa2.07□□□□□ -2.08
TTC39C-201ENST00000304621 SPRR2FQ96RM1 72 aa2.06□□□□□ -2.08
TTC39C-201ENST00000304621 SPRR5A0A1B0GTR4 108 aa2.05□□□□□ -2.08
TTC39C-201ENST00000304621 KRTAP19-3Q7Z4W3 81 aa2.01□□□□□ -2.09
TTC39C-201ENST00000304621 KRTAP6-3Q3LI67 103 aa2.01□□□□□ -2.09
TTC39C-201ENST00000304621 LCE3CQ5T5A8 94 aa2.01□□□□□ -2.09
TTC39C-201ENST00000304621 MACF1Q9UPN3 7388 aaKnown RBP2□□□□□ -2.09
TTC39C-201ENST00000304621 KRTAP4-3Q9BYR4 195 aa1.99□□□□□ -2.09
TTC39C-201ENST00000304621 MT1MQ8N339 61 aa1.99□□□□□ -2.09
TTC39C-201ENST00000304621 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
TTC39C-201ENST00000304621 INE1O15225 51 aa1.97□□□□□ -2.09
TTC39C-201ENST00000304621 MT1GP13640 62 aa1.97□□□□□ -2.09
TTC39C-201ENST00000304621 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
TTC39C-201ENST00000304621 SPRR2EP22531 72 aa1.96□□□□□ -2.1
TTC39C-201ENST00000304621 SPRR2BP35325 72 aa1.96□□□□□ -2.1
TTC39C-201ENST00000304621 SPRR2AP35326 72 aa1.96□□□□□ -2.1
TTC39C-201ENST00000304621 KRTAP9-6A8MVA2 160 aa1.95□□□□□ -2.1
TTC39C-201ENST00000304621 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
TTC39C-201ENST00000304621 SYNE2Q8WXH0 6885 aaKnown RBP1.91□□□□□ -2.1
TTC39C-201ENST00000304621 SPRR2DP22532 72 aa1.89□□□□□ -2.11
TTC39C-201ENST00000304621 MDN1Q9NU22 5596 aa1.87□□□□□ -2.11
TTC39C-201ENST00000304621 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
TTC39C-201ENST00000304621 KRTAP5-4Q6L8H1 288 aa1.84□□□□□ -2.11
TTC39C-201ENST00000304621 KRTAP5-5Q701N2 237 aaPredicted RBP1.8□□□□□ -2.12
TTC39C-201ENST00000304621 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
TTC39C-201ENST00000304621 KRTAP2-3P0C7H8 128 aa1.75□□□□□ -2.13
TTC39C-201ENST00000304621 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
TTC39C-201ENST00000304621 KRTAP2-4Q9BYR9 128 aa1.75□□□□□ -2.13
TTC39C-201ENST00000304621 KRTAP2-1Q9BYU5 128 aa1.75□□□□□ -2.13
TTC39C-201ENST00000304621 DSTQ03001 7570 aaKnown RBP1.75□□□□□ -2.13
TTC39C-201ENST00000304621 NEBP20929 6669 aa1.75□□□□□ -2.13
TTC39C-201ENST00000304621 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
TTC39C-201ENST00000304621 MT1AP04731 61 aa1.74□□□□□ -2.13
TTC39C-201ENST00000304621 KRTAP20-1Q3LI63 56 aa1.73□□□□□ -2.13
TTC39C-201ENST00000304621 LCE3EQ5T5B0 92 aa1.68□□□□□ -2.14
TTC39C-201ENST00000304621 MT4P47944 62 aa1.66□□□□□ -2.14
TTC39C-201ENST00000304621 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
TTC39C-201ENST00000304621 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
TTC39C-201ENST00000304621 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
TTC39C-201ENST00000304621 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
TTC39C-201ENST00000304621 KRTAP20-2Q3LI61 65 aa1.61□□□□□ -2.15
TTC39C-201ENST00000304621 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
TTC39C-201ENST00000304621 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
TTC39C-201ENST00000304621 OBSCNQ5VST9 7968 aa1.49□□□□□ -2.17
TTC39C-201ENST00000304621 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
TTC39C-201ENST00000304621 PRM1P04553 51 aa1.4□□□□□ -2.18
TTC39C-201ENST00000304621 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.18
TTC39C-201ENST00000304621 LCE1CQ5T751 118 aa1.39□□□□□ -2.19
TTC39C-201ENST00000304621 LCE1BQ5T7P3 118 aa1.39□□□□□ -2.19
TTC39C-201ENST00000304621 KRTAP5-10Q6L8G5 202 aa1.37□□□□□ -2.19
TTC39C-201ENST00000304621 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
TTC39C-201ENST00000304621 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
TTC39C-201ENST00000304621 MUC19Q7Z5P9 8384 aa1.07□□□□□ -2.24
TTC39C-201ENST00000304621 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
TTC39C-201ENST00000304621 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
TTC39C-201ENST00000304621 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 104.2 ms