RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 LCE5AQ5TCM9 118 aa8.78□□□□□ -1
HOXC9-201ENST00000303450 KRTAP20-1Q3LI63 56 aa8.77□□□□□ -1.01
HOXC9-201ENST00000303450 MT1LQ93083 61 aa8.75□□□□□ -1.01
HOXC9-201ENST00000303450 MT1GP13640 62 aa8.71□□□□□ -1.01
HOXC9-201ENST00000303450 PP632Q6XCG6 107 aa8.71□□□□□ -1.01
HOXC9-201ENST00000303450 KRTAP2-3P0C7H8 128 aa8.7□□□□□ -1.02
HOXC9-201ENST00000303450 KRTAP2-4Q9BYR9 128 aa8.7□□□□□ -1.02
HOXC9-201ENST00000303450 PMAIP1Q13794 54 aa8.59□□□□□ -1.03
HOXC9-201ENST00000303450 MT1MQ8N339 61 aa8.57□□□□□ -1.04
HOXC9-201ENST00000303450 LCE3BQ5TA77 95 aa8.56□□□□□ -1.04
HOXC9-201ENST00000303450 KRTAP15-1Q3LI76 137 aa8.47□□□□□ -1.05
HOXC9-201ENST00000303450 KRTAP2-2Q9BYT5 123 aa8.46□□□□□ -1.05
HOXC9-201ENST00000303450 KRTAP2-1Q9BYU5 128 aa8.46□□□□□ -1.05
HOXC9-201ENST00000303450 PRO0628Q9UI54 55 aa8.46□□□□□ -1.05
HOXC9-201ENST00000303450 DSTQ03001 7570 aaKnown RBP8.42□□□□□ -1.06
HOXC9-201ENST00000303450 KRTAP19-4Q3LI73 84 aa8.37□□□□□ -1.07
HOXC9-201ENST00000303450 KRTAP4-7Q9BYR0 210 aa8.35□□□□□ -1.07
HOXC9-201ENST00000303450 KRTAP4-3Q9BYR4 195 aa8.34□□□□□ -1.07
HOXC9-201ENST00000303450 LCE3CQ5T5A8 94 aa8.2□□□□□ -1.1
HOXC9-201ENST00000303450 PRAC1Q96KF2 57 aa8.11□□□□□ -1.11
HOXC9-201ENST00000303450 KTN1-AS1Q86SY8 53 aa7.95□□□□□ -1.14
HOXC9-201ENST00000303450 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
HOXC9-201ENST00000303450 LCE4AQ5TA78 99 aa7.85□□□□□ -1.15
HOXC9-201ENST00000303450 KRTAP4-9Q9BYQ8 210 aa7.8□□□□□ -1.16
HOXC9-201ENST00000303450 KRTAP5-4Q6L8H1 288 aa7.79□□□□□ -1.16
HOXC9-201ENST00000303450 SVIPQ8NHG7 77 aa7.78□□□□□ -1.16
HOXC9-201ENST00000303450 KRTAP5-5Q701N2 237 aaPredicted RBP7.78□□□□□ -1.16
HOXC9-201ENST00000303450 KRTAP9-6A8MVA2 160 aa7.7□□□□□ -1.18
HOXC9-201ENST00000303450 MT4P47944 62 aa7.7□□□□□ -1.18
HOXC9-201ENST00000303450 LCE1DQ5T752 114 aa7.68□□□□□ -1.18
HOXC9-201ENST00000303450 HMCN1Q96RW7 5635 aa7.54□□□□□ -1.2
HOXC9-201ENST00000303450 KRTAP4-6Q9BYQ5 205 aa7.53□□□□□ -1.2
HOXC9-201ENST00000303450 KRTAP12-4P60329 112 aa7.47□□□□□ -1.21
HOXC9-201ENST00000303450 MT1AP04731 61 aa7.45□□□□□ -1.22
HOXC9-201ENST00000303450 SYNE1Q8NF91 8797 aaKnown RBP7.4□□□□□ -1.23
HOXC9-201ENST00000303450 SPRR5A0A1B0GTR4 108 aa7.37□□□□□ -1.23
HOXC9-201ENST00000303450 KRTAP6-1Q3LI64 71 aa7.37□□□□□ -1.23
HOXC9-201ENST00000303450 KRTAP20-2Q3LI61 65 aa7.33□□□□□ -1.24
HOXC9-201ENST00000303450 KRTAP9-4Q9BYQ2 154 aa7.14□□□□□ -1.27
HOXC9-201ENST00000303450 KRTAP5-3Q6L8H2 238 aa7.08□□□□□ -1.28
HOXC9-201ENST00000303450 AHNAK2Q8IVF2 5795 aa7.06□□□□□ -1.28
HOXC9-201ENST00000303450 GPR98Q8WXG9 6306 aa6.98□□□□□ -1.29
HOXC9-201ENST00000303450 KRTAP6-2Q3LI66 62 aa6.93□□□□□ -1.3
HOXC9-201ENST00000303450 KRTAP5-2Q701N4 177 aa6.93□□□□□ -1.3
HOXC9-201ENST00000303450 MT3P25713 68 aa6.81□□□□□ -1.32
HOXC9-201ENST00000303450 KRTAP5-10Q6L8G5 202 aa6.81□□□□□ -1.32
HOXC9-201ENST00000303450 LUZP6Q538Z0 58 aa6.79□□□□□ -1.32
HOXC9-201ENST00000303450 KRTAP4-11Q9BYQ6 195 aa6.55□□□□□ -1.36
HOXC9-201ENST00000303450 KRTAP5-7Q6L8G8 165 aa6.46□□□□□ -1.37
HOXC9-201ENST00000303450 OBSCNQ5VST9 7968 aa6.39□□□□□ -1.39
HOXC9-201ENST00000303450 KRTAP5-8O75690 187 aa6.3□□□□□ -1.4
HOXC9-201ENST00000303450 KRTAP5-1Q6L8H4 278 aa6.11□□□□□ -1.43
HOXC9-201ENST00000303450 LCE1EQ5T753 118 aa6.08□□□□□ -1.44
HOXC9-201ENST00000303450 LCE3DQ9BYE3 92 aa6.04□□□□□ -1.44
HOXC9-201ENST00000303450 NDUFAF8A1L188 74 aa6.03□□□□□ -1.44
HOXC9-201ENST00000303450 MUC5ACP98088 5654 aa5.97□□□□□ -1.45
HOXC9-201ENST00000303450 H3BS24 57 aa5.9□□□□□ -1.46
HOXC9-201ENST00000303450 KRTAP9-9Q9BYP9 154 aa5.89□□□□□ -1.47
HOXC9-201ENST00000303450 LCE3EQ5T5B0 92 aa5.79□□□□□ -1.48
HOXC9-201ENST00000303450 MUC5BQ9HC84 5762 aaPredicted RBP5.74□□□□□ -1.49
HOXC9-201ENST00000303450 LCE1BQ5T7P3 118 aa5.71□□□□□ -1.5
HOXC9-201ENST00000303450 KRTAP4-2Q9BYR5 136 aa5.68□□□□□ -1.5
HOXC9-201ENST00000303450 LCE1CQ5T751 118 aa5.64□□□□□ -1.51
HOXC9-201ENST00000303450 AHNAKQ09666 5890 aaKnown RBP5.64□□□□□ -1.51
HOXC9-201ENST00000303450 KRTAP4-12Q9BQ66 201 aa5.55□□□□□ -1.52
HOXC9-201ENST00000303450 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.2□□□□□ -1.58
HOXC9-201ENST00000303450 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
HOXC9-201ENST00000303450 KRTAP5-11Q6L8G4 156 aa5.05□□□□□ -1.6
HOXC9-201ENST00000303450 INE1O15225 51 aa4.94□□□□□ -1.62
HOXC9-201ENST00000303450 KRTAP21-2Q3LI59 83 aa4.84□□□□□ -1.63
HOXC9-201ENST00000303450 LCE1FQ5T754 118 aa4.77□□□□□ -1.65
HOXC9-201ENST00000303450 PRM1P04553 51 aa4.68□□□□□ -1.66
HOXC9-201ENST00000303450 KRTAP4-4Q9BYR3 166 aa4.36□□□□□ -1.71
HOXC9-201ENST00000303450 PHGR1C9JFL3 82 aa4.35□□□□□ -1.71
HOXC9-201ENST00000303450 MUC19Q7Z5P9 8384 aa3.91□□□□□ -1.78
HOXC9-201ENST00000303450 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
HOXC9-201ENST00000303450 MUC16Q8WXI7 14507 aa2.76□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 77.5 ms