RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 KRTAP2-3P0C7H8 128 aa3.93□□□□□ -1.78
HIPK3-201ENST00000303296 KRTAP2-4Q9BYR9 128 aa3.93□□□□□ -1.78
HIPK3-201ENST00000303296 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
HIPK3-201ENST00000303296 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
HIPK3-201ENST00000303296 HSPG2P98160 4391 aa3.89□□□□□ -1.79
HIPK3-201ENST00000303296 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
HIPK3-201ENST00000303296 MT1AP04731 61 aa3.86□□□□□ -1.79
HIPK3-201ENST00000303296 RYR1P21817 5038 aa3.86□□□□□ -1.79
HIPK3-201ENST00000303296 LCE2AQ5TA79 106 aaPredicted RBP3.76□□□□□ -1.81
HIPK3-201ENST00000303296 KRTAP9-7A8MTY7 169 aa3.75□□□□□ -1.81
HIPK3-201ENST00000303296 HYDINQ4G0P3 5121 aa3.73□□□□□ -1.81
HIPK3-201ENST00000303296 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
HIPK3-201ENST00000303296 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
HIPK3-201ENST00000303296 KMT2CQ8NEZ4 4911 aaKnown RBP3.65□□□□□ -1.83
HIPK3-201ENST00000303296 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
HIPK3-201ENST00000303296 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
HIPK3-201ENST00000303296 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
HIPK3-201ENST00000303296 KIAA1109Q2LD37 5005 aa3.62□□□□□ -1.83
HIPK3-201ENST00000303296 LRP2P98164 4655 aa3.61□□□□□ -1.83
HIPK3-201ENST00000303296 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
HIPK3-201ENST00000303296 RYR3Q15413 4870 aa3.55□□□□□ -1.84
HIPK3-201ENST00000303296 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
HIPK3-201ENST00000303296 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
HIPK3-201ENST00000303296 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
HIPK3-201ENST00000303296 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
HIPK3-201ENST00000303296 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.86
HIPK3-201ENST00000303296 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.87
HIPK3-201ENST00000303296 PCLOQ9Y6V0 5065 aa3.39□□□□□ -1.87
HIPK3-201ENST00000303296 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
HIPK3-201ENST00000303296 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
HIPK3-201ENST00000303296 RNF213Q63HN8 5207 aa3.34□□□□□ -1.87
HIPK3-201ENST00000303296 HERC2O95714 4834 aa3.32□□□□□ -1.88
HIPK3-201ENST00000303296 ABCA13Q86UQ4 5058 aa3.31□□□□□ -1.88
HIPK3-201ENST00000303296 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
HIPK3-201ENST00000303296 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
HIPK3-201ENST00000303296 RYR2Q92736 4967 aa3.29□□□□□ -1.88
HIPK3-201ENST00000303296 MUC2Q02817 5179 aa3.28□□□□□ -1.88
HIPK3-201ENST00000303296 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
HIPK3-201ENST00000303296 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
HIPK3-201ENST00000303296 HERC1Q15751 4861 aa3.22□□□□□ -1.89
HIPK3-201ENST00000303296 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
HIPK3-201ENST00000303296 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
HIPK3-201ENST00000303296 UBR4Q5T4S7 5183 aa3.17□□□□□ -1.9
HIPK3-201ENST00000303296 FAT4Q6V0I7 4981 aa3.16□□□□□ -1.9
HIPK3-201ENST00000303296 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
HIPK3-201ENST00000303296 BIRC6Q9NR09 4857 aa3.03□□□□□ -1.92
HIPK3-201ENST00000303296 USH2AO75445 5202 aa2.9□□□□□ -1.95
HIPK3-201ENST00000303296 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
HIPK3-201ENST00000303296 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
HIPK3-201ENST00000303296 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
HIPK3-201ENST00000303296 FCGBPQ9Y6R7 5405 aaPredicted RBP2.61□□□□□ -1.99
HIPK3-201ENST00000303296 KMT2DO14686 5537 aa2.6□□□□□ -1.99
HIPK3-201ENST00000303296 SSPOA2VEC9 5147 aa2.56□□□□□ -2
HIPK3-201ENST00000303296 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
HIPK3-201ENST00000303296 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
HIPK3-201ENST00000303296 MUC12Q9UKN1 5478 aa2.49□□□□□ -2.01
HIPK3-201ENST00000303296 NEBP20929 6669 aa2.44□□□□□ -2.02
HIPK3-201ENST00000303296 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
HIPK3-201ENST00000303296 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
HIPK3-201ENST00000303296 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
HIPK3-201ENST00000303296 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
HIPK3-201ENST00000303296 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
HIPK3-201ENST00000303296 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
HIPK3-201ENST00000303296 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
HIPK3-201ENST00000303296 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
HIPK3-201ENST00000303296 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
HIPK3-201ENST00000303296 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
HIPK3-201ENST00000303296 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
HIPK3-201ENST00000303296 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
HIPK3-201ENST00000303296 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
HIPK3-201ENST00000303296 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
HIPK3-201ENST00000303296 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
HIPK3-201ENST00000303296 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
HIPK3-201ENST00000303296 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
HIPK3-201ENST00000303296 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
HIPK3-201ENST00000303296 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
HIPK3-201ENST00000303296 KRTAP5-7Q6L8G8 165 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 83.9 ms