RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 MT4P47944 62 aa4.33□□□□□ -1.72
ABR-202ENST00000302538 FSIP2Q5CZC0 6907 aa4.29□□□□□ -1.72
ABR-202ENST00000302538 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
ABR-202ENST00000302538 MT1LQ93083 61 aa4.25□□□□□ -1.73
ABR-202ENST00000302538 MT1EP04732 61 aa4.24□□□□□ -1.73
ABR-202ENST00000302538 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
ABR-202ENST00000302538 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
ABR-202ENST00000302538 MT1MQ8N339 61 aa4.15□□□□□ -1.75
ABR-202ENST00000302538 MT3P25713 68 aa4.13□□□□□ -1.75
ABR-202ENST00000302538 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
ABR-202ENST00000302538 KRTAP9-7A8MTY7 169 aa4.1□□□□□ -1.75
ABR-202ENST00000302538 MUC2Q02817 5179 aa4.1□□□□□ -1.75
ABR-202ENST00000302538 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
ABR-202ENST00000302538 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
ABR-202ENST00000302538 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
ABR-202ENST00000302538 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
ABR-202ENST00000302538 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
ABR-202ENST00000302538 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
ABR-202ENST00000302538 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
ABR-202ENST00000302538 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.77
ABR-202ENST00000302538 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.93□□□□□ -1.78
ABR-202ENST00000302538 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
ABR-202ENST00000302538 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
ABR-202ENST00000302538 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
ABR-202ENST00000302538 LCE5AQ5TCM9 118 aa3.85□□□□□ -1.79
ABR-202ENST00000302538 MT1AP04731 61 aa3.84□□□□□ -1.79
ABR-202ENST00000302538 USH2AO75445 5202 aa3.81□□□□□ -1.8
ABR-202ENST00000302538 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
ABR-202ENST00000302538 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
ABR-202ENST00000302538 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
ABR-202ENST00000302538 PRM1P04553 51 aa3.76□□□□□ -1.81
ABR-202ENST00000302538 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
ABR-202ENST00000302538 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
ABR-202ENST00000302538 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
ABR-202ENST00000302538 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
ABR-202ENST00000302538 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
ABR-202ENST00000302538 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
ABR-202ENST00000302538 MACF1Q9UPN3 7388 aaKnown RBP3.54□□□□□ -1.84
ABR-202ENST00000302538 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
ABR-202ENST00000302538 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
ABR-202ENST00000302538 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
ABR-202ENST00000302538 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
ABR-202ENST00000302538 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
ABR-202ENST00000302538 SSPOA2VEC9 5147 aa3.52□□□□□ -1.85
ABR-202ENST00000302538 KMT2DO14686 5537 aa3.45□□□□□ -1.86
ABR-202ENST00000302538 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
ABR-202ENST00000302538 NEBP20929 6669 aa3.39□□□□□ -1.87
ABR-202ENST00000302538 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
ABR-202ENST00000302538 MUC12Q9UKN1 5478 aa3.32□□□□□ -1.88
ABR-202ENST00000302538 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
ABR-202ENST00000302538 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
ABR-202ENST00000302538 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
ABR-202ENST00000302538 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
ABR-202ENST00000302538 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
ABR-202ENST00000302538 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
ABR-202ENST00000302538 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
ABR-202ENST00000302538 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
ABR-202ENST00000302538 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
ABR-202ENST00000302538 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
ABR-202ENST00000302538 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
ABR-202ENST00000302538 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
ABR-202ENST00000302538 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
ABR-202ENST00000302538 MUC5ACP98088 5654 aa2.55□□□□□ -2
ABR-202ENST00000302538 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
ABR-202ENST00000302538 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
ABR-202ENST00000302538 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
ABR-202ENST00000302538 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
ABR-202ENST00000302538 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
ABR-202ENST00000302538 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
ABR-202ENST00000302538 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
ABR-202ENST00000302538 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
ABR-202ENST00000302538 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.08
ABR-202ENST00000302538 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
ABR-202ENST00000302538 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
ABR-202ENST00000302538 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
ABR-202ENST00000302538 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
ABR-202ENST00000302538 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 78.3 ms