RNA–Protein interactions for RNA: ENST00000301765.9

VPS37C-201, Transcript of VPS37C, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37C, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-201ENST00000301765 MT1LQ93083 61 aa5.66□□□□□ -1.5
VPS37C-201ENST00000301765 KRTAP4-3Q9BYR4 195 aa5.64□□□□□ -1.51
VPS37C-201ENST00000301765 KRTAP19-6Q3LI70 58 aa5.61□□□□□ -1.51
VPS37C-201ENST00000301765 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
VPS37C-201ENST00000301765 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
VPS37C-201ENST00000301765 CRCT1Q9UGL9 99 aa5.56□□□□□ -1.52
VPS37C-201ENST00000301765 LCE2DQ5TA82 110 aaPredicted RBP5.53□□□□□ -1.52
VPS37C-201ENST00000301765 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
VPS37C-201ENST00000301765 KRTAP12-4P60329 112 aa5.51□□□□□ -1.53
VPS37C-201ENST00000301765 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
VPS37C-201ENST00000301765 MT1GP13640 62 aa5.45□□□□□ -1.54
VPS37C-201ENST00000301765 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
VPS37C-201ENST00000301765 MDN1Q9NU22 5596 aa5.37□□□□□ -1.55
VPS37C-201ENST00000301765 SPRR2FQ96RM1 72 aa5.32□□□□□ -1.56
VPS37C-201ENST00000301765 MT1MQ8N339 61 aa5.3□□□□□ -1.56
VPS37C-201ENST00000301765 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
VPS37C-201ENST00000301765 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
VPS37C-201ENST00000301765 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
VPS37C-201ENST00000301765 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
VPS37C-201ENST00000301765 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
VPS37C-201ENST00000301765 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
VPS37C-201ENST00000301765 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
VPS37C-201ENST00000301765 PRM1P04553 51 aa4.96□□□□□ -1.62
VPS37C-201ENST00000301765 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
VPS37C-201ENST00000301765 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
VPS37C-201ENST00000301765 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
VPS37C-201ENST00000301765 SPRR2EP22531 72 aa4.83□□□□□ -1.64
VPS37C-201ENST00000301765 SPRR2BP35325 72 aa4.83□□□□□ -1.64
VPS37C-201ENST00000301765 SPRR2AP35326 72 aa4.83□□□□□ -1.64
VPS37C-201ENST00000301765 KRTAP5-5Q701N2 237 aaPredicted RBP4.82□□□□□ -1.64
VPS37C-201ENST00000301765 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
VPS37C-201ENST00000301765 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
VPS37C-201ENST00000301765 MT1AP04731 61 aa4.69□□□□□ -1.66
VPS37C-201ENST00000301765 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
VPS37C-201ENST00000301765 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
VPS37C-201ENST00000301765 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
VPS37C-201ENST00000301765 SPRR2DP22532 72 aa4.59□□□□□ -1.67
VPS37C-201ENST00000301765 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.57□□□□□ -1.68
VPS37C-201ENST00000301765 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
VPS37C-201ENST00000301765 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
VPS37C-201ENST00000301765 NEBP20929 6669 aa4.33□□□□□ -1.72
VPS37C-201ENST00000301765 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
VPS37C-201ENST00000301765 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
VPS37C-201ENST00000301765 MT4P47944 62 aa4.23□□□□□ -1.73
VPS37C-201ENST00000301765 MT3P25713 68 aa4.18□□□□□ -1.74
VPS37C-201ENST00000301765 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
VPS37C-201ENST00000301765 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
VPS37C-201ENST00000301765 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
VPS37C-201ENST00000301765 KRTAP20-2Q3LI61 65 aa3.95□□□□□ -1.78
VPS37C-201ENST00000301765 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
VPS37C-201ENST00000301765 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
VPS37C-201ENST00000301765 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
VPS37C-201ENST00000301765 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
VPS37C-201ENST00000301765 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
VPS37C-201ENST00000301765 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
VPS37C-201ENST00000301765 MUC19Q7Z5P9 8384 aa3.66□□□□□ -1.82
VPS37C-201ENST00000301765 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
VPS37C-201ENST00000301765 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
VPS37C-201ENST00000301765 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
VPS37C-201ENST00000301765 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
VPS37C-201ENST00000301765 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
VPS37C-201ENST00000301765 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
VPS37C-201ENST00000301765 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
VPS37C-201ENST00000301765 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
VPS37C-201ENST00000301765 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
VPS37C-201ENST00000301765 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
VPS37C-201ENST00000301765 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
VPS37C-201ENST00000301765 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
VPS37C-201ENST00000301765 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
VPS37C-201ENST00000301765 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
VPS37C-201ENST00000301765 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
VPS37C-201ENST00000301765 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
VPS37C-201ENST00000301765 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
VPS37C-201ENST00000301765 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
VPS37C-201ENST00000301765 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
VPS37C-201ENST00000301765 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
VPS37C-201ENST00000301765 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 106 ms