RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 ROMO1P60602 79 aa2.21□□□□□ -2.06
PATL1-201ENST00000300146 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
PATL1-201ENST00000300146 LCE1AQ5T7P2 110 aa2.2□□□□□ -2.06
PATL1-201ENST00000300146 KRTAP12-2P59991 146 aa2.19□□□□□ -2.06
PATL1-201ENST00000300146 KRTAP2-3P0C7H8 128 aa2.18□□□□□ -2.06
PATL1-201ENST00000300146 KRTAP2-4Q9BYR9 128 aa2.18□□□□□ -2.06
PATL1-201ENST00000300146 KRTAP10-12P60413 245 aa2.17□□□□□ -2.06
PATL1-201ENST00000300146 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
PATL1-201ENST00000300146 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
PATL1-201ENST00000300146 KRTAP9-9Q9BYP9 154 aa2.15□□□□□ -2.07
PATL1-201ENST00000300146 LCE3BQ5TA77 95 aa2.15□□□□□ -2.07
PATL1-201ENST00000300146 KRTAP25-1Q3LHN0 102 aa2.14□□□□□ -2.07
PATL1-201ENST00000300146 KRTAP4-9Q9BYQ8 210 aa2.13□□□□□ -2.07
PATL1-201ENST00000300146 LCE5AQ5TCM9 118 aa2.12□□□□□ -2.07
PATL1-201ENST00000300146 KRTAP2-2Q9BYT5 123 aa2.12□□□□□ -2.07
PATL1-201ENST00000300146 KRTAP2-1Q9BYU5 128 aa2.12□□□□□ -2.07
PATL1-201ENST00000300146 KRTAP19-5Q3LI72 72 aa2.12□□□□□ -2.07
PATL1-201ENST00000300146 TNP1P09430 55 aa2.11□□□□□ -2.07
PATL1-201ENST00000300146 C10orf95Q9H7T3 257 aa2.11□□□□□ -2.07
PATL1-201ENST00000300146 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
PATL1-201ENST00000300146 LCE3AQ5TA76 89 aa2.09□□□□□ -2.07
PATL1-201ENST00000300146 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
PATL1-201ENST00000300146 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
PATL1-201ENST00000300146 LOC100996750A0A140TA64 210 aa2.07□□□□□ -2.08
PATL1-201ENST00000300146 KRTAP19-7Q3SYF9 63 aa2.07□□□□□ -2.08
PATL1-201ENST00000300146 KRTAP4-6Q9BYQ5 205 aa2.07□□□□□ -2.08
PATL1-201ENST00000300146 MT1EP04732 61 aa2.06□□□□□ -2.08
PATL1-201ENST00000300146 MT4P47944 62 aa2.06□□□□□ -2.08
PATL1-201ENST00000300146 KRTAP4-7Q9BYR0 210 aa2.05□□□□□ -2.08
PATL1-201ENST00000300146 KRTAP19-3Q7Z4W3 81 aa2.05□□□□□ -2.08
PATL1-201ENST00000300146 PP632Q6XCG6 107 aa2.03□□□□□ -2.08
PATL1-201ENST00000300146 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
PATL1-201ENST00000300146 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
PATL1-201ENST00000300146 MT1GP13640 62 aa1.99□□□□□ -2.09
PATL1-201ENST00000300146 MT1LQ93083 61 aa1.98□□□□□ -2.09
PATL1-201ENST00000300146 MT1MQ8N339 61 aa1.97□□□□□ -2.09
PATL1-201ENST00000300146 LCE1DQ5T752 114 aa1.95□□□□□ -2.1
PATL1-201ENST00000300146 MT3P25713 68 aa1.94□□□□□ -2.1
PATL1-201ENST00000300146 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
PATL1-201ENST00000300146 SPRR5A0A1B0GTR4 108 aa1.91□□□□□ -2.1
PATL1-201ENST00000300146 LCE1FQ5T754 118 aa1.84□□□□□ -2.12
PATL1-201ENST00000300146 LCE3CQ5T5A8 94 aa1.82□□□□□ -2.12
PATL1-201ENST00000300146 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
PATL1-201ENST00000300146 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
PATL1-201ENST00000300146 KRTAP4-11Q9BYQ6 195 aa1.77□□□□□ -2.13
PATL1-201ENST00000300146 KRTAP5-5Q701N2 237 aaPredicted RBP1.76□□□□□ -2.13
PATL1-201ENST00000300146 KRTAP20-2Q3LI61 65 aa1.75□□□□□ -2.13
PATL1-201ENST00000300146 KRTAP5-3Q6L8H2 238 aa1.74□□□□□ -2.13
PATL1-201ENST00000300146 INE1O15225 51 aa1.73□□□□□ -2.13
PATL1-201ENST00000300146 KRTAP5-4Q6L8H1 288 aa1.73□□□□□ -2.13
PATL1-201ENST00000300146 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
PATL1-201ENST00000300146 KRTAP9-6A8MVA2 160 aa1.71□□□□□ -2.14
PATL1-201ENST00000300146 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
PATL1-201ENST00000300146 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
PATL1-201ENST00000300146 LCE3EQ5T5B0 92 aa1.66□□□□□ -2.14
PATL1-201ENST00000300146 MT1AP04731 61 aa1.65□□□□□ -2.15
PATL1-201ENST00000300146 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
PATL1-201ENST00000300146 KRTAP4-2Q9BYR5 136 aa1.64□□□□□ -2.15
PATL1-201ENST00000300146 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
PATL1-201ENST00000300146 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
PATL1-201ENST00000300146 KRTAP5-2Q701N4 177 aa1.57□□□□□ -2.16
PATL1-201ENST00000300146 KRTAP5-8O75690 187 aa1.56□□□□□ -2.16
PATL1-201ENST00000300146 LCE1BQ5T7P3 118 aa1.52□□□□□ -2.17
PATL1-201ENST00000300146 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
PATL1-201ENST00000300146 LCE3DQ9BYE3 92 aa1.49□□□□□ -2.17
PATL1-201ENST00000300146 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.46□□□□□ -2.18
PATL1-201ENST00000300146 LCE1EQ5T753 118 aa1.44□□□□□ -2.18
PATL1-201ENST00000300146 KRTAP5-1Q6L8H4 278 aa1.41□□□□□ -2.18
PATL1-201ENST00000300146 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
PATL1-201ENST00000300146 LCE1CQ5T751 118 aa1.22□□□□□ -2.21
PATL1-201ENST00000300146 KRTAP4-4Q9BYR3 166 aa1.21□□□□□ -2.22
PATL1-201ENST00000300146 KRTAP5-11Q6L8G4 156 aa1.2□□□□□ -2.22
PATL1-201ENST00000300146 PRM1P04553 51 aa1.11□□□□□ -2.23
PATL1-201ENST00000300146 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
PATL1-201ENST00000300146 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
PATL1-201ENST00000300146 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
PATL1-201ENST00000300146 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 150.6 ms