RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 LPAP08519 4548 aa4.34□□□□□ -1.71
SCN3B-201ENST00000299333 BIRC6Q9NR09 4857 aa4.34□□□□□ -1.71
SCN3B-201ENST00000299333 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
SCN3B-201ENST00000299333 KMT2CQ8NEZ4 4911 aaKnown RBP4.28□□□□□ -1.72
SCN3B-201ENST00000299333 KRTAP19-6Q3LI70 58 aa4.28□□□□□ -1.73
SCN3B-201ENST00000299333 KRTAP2-3P0C7H8 128 aa4.25□□□□□ -1.73
SCN3B-201ENST00000299333 KRTAP2-4Q9BYR9 128 aa4.25□□□□□ -1.73
SCN3B-201ENST00000299333 KRTAP2-1Q9BYU5 128 aa4.25□□□□□ -1.73
SCN3B-201ENST00000299333 PCLOQ9Y6V0 5065 aa4.24□□□□□ -1.73
SCN3B-201ENST00000299333 MT1AP04731 61 aa4.18□□□□□ -1.74
SCN3B-201ENST00000299333 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
SCN3B-201ENST00000299333 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
SCN3B-201ENST00000299333 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
SCN3B-201ENST00000299333 EPPK1P58107 5090 aaKnown RBP4.08□□□□□ -1.76
SCN3B-201ENST00000299333 FSIP2Q5CZC0 6907 aa4.03□□□□□ -1.76
SCN3B-201ENST00000299333 KRTAP9-7A8MTY7 169 aa3.99□□□□□ -1.77
SCN3B-201ENST00000299333 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
SCN3B-201ENST00000299333 ABCA13Q86UQ4 5058 aa3.98□□□□□ -1.77
SCN3B-201ENST00000299333 LCE2AQ5TA79 106 aaPredicted RBP3.98□□□□□ -1.77
SCN3B-201ENST00000299333 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
SCN3B-201ENST00000299333 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
SCN3B-201ENST00000299333 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
SCN3B-201ENST00000299333 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
SCN3B-201ENST00000299333 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
SCN3B-201ENST00000299333 MUC2Q02817 5179 aa3.89□□□□□ -1.79
SCN3B-201ENST00000299333 RNF213Q63HN8 5207 aa3.87□□□□□ -1.79
SCN3B-201ENST00000299333 FAT4Q6V0I7 4981 aa3.86□□□□□ -1.79
SCN3B-201ENST00000299333 KRTAP9-2Q9BYQ4 174 aa3.85□□□□□ -1.79
SCN3B-201ENST00000299333 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.79
SCN3B-201ENST00000299333 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
SCN3B-201ENST00000299333 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
SCN3B-201ENST00000299333 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
SCN3B-201ENST00000299333 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
SCN3B-201ENST00000299333 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
SCN3B-201ENST00000299333 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
SCN3B-201ENST00000299333 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
SCN3B-201ENST00000299333 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
SCN3B-201ENST00000299333 KRTAP9-6A0A140TA67 174 aa3.57□□□□□ -1.84
SCN3B-201ENST00000299333 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
SCN3B-201ENST00000299333 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
SCN3B-201ENST00000299333 USH2AO75445 5202 aa3.42□□□□□ -1.86
SCN3B-201ENST00000299333 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
SCN3B-201ENST00000299333 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
SCN3B-201ENST00000299333 KMT2DO14686 5537 aa3.39□□□□□ -1.87
SCN3B-201ENST00000299333 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
SCN3B-201ENST00000299333 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
SCN3B-201ENST00000299333 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
SCN3B-201ENST00000299333 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
SCN3B-201ENST00000299333 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
SCN3B-201ENST00000299333 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
SCN3B-201ENST00000299333 MUC12Q9UKN1 5478 aa3.1□□□□□ -1.91
SCN3B-201ENST00000299333 SSPOA2VEC9 5147 aa3.1□□□□□ -1.91
SCN3B-201ENST00000299333 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
SCN3B-201ENST00000299333 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
SCN3B-201ENST00000299333 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
SCN3B-201ENST00000299333 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
SCN3B-201ENST00000299333 NEBP20929 6669 aa2.88□□□□□ -1.95
SCN3B-201ENST00000299333 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
SCN3B-201ENST00000299333 MDN1Q9NU22 5596 aa2.77□□□□□ -1.97
SCN3B-201ENST00000299333 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
SCN3B-201ENST00000299333 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
SCN3B-201ENST00000299333 KRTAP5-3Q6L8H2 238 aa2.46□□□□□ -2.02
SCN3B-201ENST00000299333 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
SCN3B-201ENST00000299333 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
SCN3B-201ENST00000299333 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
SCN3B-201ENST00000299333 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
SCN3B-201ENST00000299333 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
SCN3B-201ENST00000299333 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
SCN3B-201ENST00000299333 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
SCN3B-201ENST00000299333 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
SCN3B-201ENST00000299333 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
SCN3B-201ENST00000299333 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
SCN3B-201ENST00000299333 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
SCN3B-201ENST00000299333 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
SCN3B-201ENST00000299333 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
SCN3B-201ENST00000299333 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
SCN3B-201ENST00000299333 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 106.7 ms