RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 KRTAP4-7Q9BYR0 210 aa1.77□□□□□ -2.13
CPSF2-201ENST00000298875 LRP1Q07954 4544 aaKnown RBP1.76□□□□□ -2.13
CPSF2-201ENST00000298875 TNXBP22105 4242 aa1.76□□□□□ -2.13
CPSF2-201ENST00000298875 PCLOQ9Y6V0 5065 aa1.76□□□□□ -2.13
CPSF2-201ENST00000298875 KRTAP19-3Q7Z4W3 81 aa1.75□□□□□ -2.13
CPSF2-201ENST00000298875 MT4P47944 62 aa1.74□□□□□ -2.13
CPSF2-201ENST00000298875 LCE4AQ5TA78 99 aa1.74□□□□□ -2.13
CPSF2-201ENST00000298875 LRP2P98164 4655 aa1.73□□□□□ -2.13
CPSF2-201ENST00000298875 KRTAP2-2Q9BYT5 123 aa1.73□□□□□ -2.13
CPSF2-201ENST00000298875 KRTAP2-1Q9BYU5 128 aa1.73□□□□□ -2.13
CPSF2-201ENST00000298875 MT1EP04732 61 aa1.72□□□□□ -2.13
CPSF2-201ENST00000298875 UBR4Q5T4S7 5183 aa1.71□□□□□ -2.14
CPSF2-201ENST00000298875 KRTAP19-2Q3LHN2 52 aa1.71□□□□□ -2.14
CPSF2-201ENST00000298875 LOC100996750A0A140TA64 210 aa1.71□□□□□ -2.14
CPSF2-201ENST00000298875 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.69□□□□□ -2.14
CPSF2-201ENST00000298875 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
CPSF2-201ENST00000298875 RNF213Q63HN8 5207 aa1.68□□□□□ -2.14
CPSF2-201ENST00000298875 MT1MQ8N339 61 aa1.68□□□□□ -2.14
CPSF2-201ENST00000298875 LCE1DQ5T752 114 aa1.67□□□□□ -2.14
CPSF2-201ENST00000298875 SYNE2Q8WXH0 6885 aaKnown RBP1.67□□□□□ -2.14
CPSF2-201ENST00000298875 MT1AP04731 61 aa1.67□□□□□ -2.14
CPSF2-201ENST00000298875 KRTAP4-3Q9BYR4 195 aa1.65□□□□□ -2.15
CPSF2-201ENST00000298875 LPAP08519 4548 aa1.64□□□□□ -2.15
CPSF2-201ENST00000298875 LCE5AQ5TCM9 118 aa1.64□□□□□ -2.15
CPSF2-201ENST00000298875 HMCN2Q8NDA2 5059 aa1.63□□□□□ -2.15
CPSF2-201ENST00000298875 FAT4Q6V0I7 4981 aa1.61□□□□□ -2.15
CPSF2-201ENST00000298875 MACF1Q9UPN3 7388 aaKnown RBP1.6□□□□□ -2.15
CPSF2-201ENST00000298875 KRTAP4-9Q9BYQ8 210 aa1.6□□□□□ -2.15
CPSF2-201ENST00000298875 KRTAP5-9P26371 169 aa1.59□□□□□ -2.16
CPSF2-201ENST00000298875 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
CPSF2-201ENST00000298875 LCE1EQ5T753 118 aa1.57□□□□□ -2.16
CPSF2-201ENST00000298875 LCE1FQ5T754 118 aa1.57□□□□□ -2.16
CPSF2-201ENST00000298875 KRTAP6-2Q3LI66 62 aa1.53□□□□□ -2.16
CPSF2-201ENST00000298875 NEBP20929 6669 aa1.53□□□□□ -2.16
CPSF2-201ENST00000298875 OBSCNQ5VST9 7968 aa1.51□□□□□ -2.17
CPSF2-201ENST00000298875 FSIP2Q5CZC0 6907 aa1.51□□□□□ -2.17
CPSF2-201ENST00000298875 USH2AO75445 5202 aa1.51□□□□□ -2.17
CPSF2-201ENST00000298875 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
CPSF2-201ENST00000298875 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
CPSF2-201ENST00000298875 KRTAP9-4Q9BYQ2 154 aa1.45□□□□□ -2.18
CPSF2-201ENST00000298875 KRTAP9-6A8MVA2 160 aa1.43□□□□□ -2.18
CPSF2-201ENST00000298875 KRTAP9-9Q9BYP9 154 aa1.43□□□□□ -2.18
CPSF2-201ENST00000298875 DSTQ03001 7570 aaKnown RBP1.42□□□□□ -2.18
CPSF2-201ENST00000298875 SYNE1Q8NF91 8797 aaKnown RBP1.42□□□□□ -2.18
CPSF2-201ENST00000298875 MUC2Q02817 5179 aa1.4□□□□□ -2.19
CPSF2-201ENST00000298875 SSPOA2VEC9 5147 aa1.35□□□□□ -2.19
CPSF2-201ENST00000298875 MDN1Q9NU22 5596 aa1.34□□□□□ -2.19
CPSF2-201ENST00000298875 KRTAP5-4Q6L8H1 288 aa1.31□□□□□ -2.2
CPSF2-201ENST00000298875 KRTAP4-11Q9BYQ6 195 aa1.3□□□□□ -2.2
CPSF2-201ENST00000298875 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
CPSF2-201ENST00000298875 KRTAP20-2Q3LI61 65 aa1.26□□□□□ -2.21
CPSF2-201ENST00000298875 MUC12Q9UKN1 5478 aa1.26□□□□□ -2.21
CPSF2-201ENST00000298875 KMT2DO14686 5537 aa1.25□□□□□ -2.21
CPSF2-201ENST00000298875 GPR98Q8WXG9 6306 aa1.24□□□□□ -2.21
CPSF2-201ENST00000298875 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
CPSF2-201ENST00000298875 KRTAP4-4Q9BYR3 166 aa1.18□□□□□ -2.22
CPSF2-201ENST00000298875 KRTAP4-6Q9BYQ5 205 aa1.18□□□□□ -2.22
CPSF2-201ENST00000298875 MUC5BQ9HC84 5762 aaPredicted RBP1.18□□□□□ -2.22
CPSF2-201ENST00000298875 KRTAP5-3Q6L8H2 238 aa1.17□□□□□ -2.22
CPSF2-201ENST00000298875 KRTAP4-12Q9BQ66 201 aa1.14□□□□□ -2.23
CPSF2-201ENST00000298875 KRTAP4-2Q9BYR5 136 aa1.14□□□□□ -2.23
CPSF2-201ENST00000298875 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
CPSF2-201ENST00000298875 KRTAP5-5Q701N2 237 aaPredicted RBP1.13□□□□□ -2.23
CPSF2-201ENST00000298875 KRTAP5-8O75690 187 aa1.08□□□□□ -2.24
CPSF2-201ENST00000298875 MUC19Q7Z5P9 8384 aa1.07□□□□□ -2.24
CPSF2-201ENST00000298875 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
CPSF2-201ENST00000298875 KRTAP5-7Q6L8G8 165 aa1.03□□□□□ -2.24
CPSF2-201ENST00000298875 KRTAP5-2Q701N4 177 aa1.03□□□□□ -2.24
CPSF2-201ENST00000298875 AHNAKQ09666 5890 aaKnown RBP1□□□□□ -2.25
CPSF2-201ENST00000298875 KRTAP5-11Q6L8G4 156 aa0.95□□□□□ -2.26
CPSF2-201ENST00000298875 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
CPSF2-201ENST00000298875 KRTAP5-1Q6L8H4 278 aa0.93□□□□□ -2.26
CPSF2-201ENST00000298875 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
CPSF2-201ENST00000298875 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.9□□□□□ -2.26
CPSF2-201ENST00000298875 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
CPSF2-201ENST00000298875 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
CPSF2-201ENST00000298875 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 81.8 ms