RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
TSPAN17-201ENST00000298564 KRTAP2-1Q9BYU5 128 aa6.08□□□□□ -1.44
TSPAN17-201ENST00000298564 FCGBPQ9Y6R7 5405 aaPredicted RBP6.06□□□□□ -1.44
TSPAN17-201ENST00000298564 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
TSPAN17-201ENST00000298564 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
TSPAN17-201ENST00000298564 KRTAP4-3Q9BYR4 195 aa5.95□□□□□ -1.46
TSPAN17-201ENST00000298564 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
TSPAN17-201ENST00000298564 MT1GP13640 62 aa5.8□□□□□ -1.48
TSPAN17-201ENST00000298564 KRTAP19-3Q7Z4W3 81 aa5.78□□□□□ -1.48
TSPAN17-201ENST00000298564 MT1MQ8N339 61 aa5.75□□□□□ -1.49
TSPAN17-201ENST00000298564 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
TSPAN17-201ENST00000298564 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
TSPAN17-201ENST00000298564 MACF1Q9UPN3 7388 aaKnown RBP5.67□□□□□ -1.5
TSPAN17-201ENST00000298564 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
TSPAN17-201ENST00000298564 LCE5AQ5TCM9 118 aa5.6□□□□□ -1.51
TSPAN17-201ENST00000298564 OBSCNQ5VST9 7968 aa5.58□□□□□ -1.52
TSPAN17-201ENST00000298564 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
TSPAN17-201ENST00000298564 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
TSPAN17-201ENST00000298564 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
TSPAN17-201ENST00000298564 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
TSPAN17-201ENST00000298564 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
TSPAN17-201ENST00000298564 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
TSPAN17-201ENST00000298564 KRTAP5-9P26371 169 aa5.28□□□□□ -1.56
TSPAN17-201ENST00000298564 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.57
TSPAN17-201ENST00000298564 SPRR2EP22531 72 aa5.19□□□□□ -1.58
TSPAN17-201ENST00000298564 SPRR2BP35325 72 aa5.19□□□□□ -1.58
TSPAN17-201ENST00000298564 SPRR2AP35326 72 aa5.19□□□□□ -1.58
TSPAN17-201ENST00000298564 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
TSPAN17-201ENST00000298564 MT1AP04731 61 aa5.13□□□□□ -1.59
TSPAN17-201ENST00000298564 KRTAP5-5Q701N2 237 aaPredicted RBP5.1□□□□□ -1.59
TSPAN17-201ENST00000298564 LCE3DQ9BYE3 92 aa5.08□□□□□ -1.6
TSPAN17-201ENST00000298564 PRM1P04553 51 aa5.06□□□□□ -1.6
TSPAN17-201ENST00000298564 LCE3EQ5T5B0 92 aa5□□□□□ -1.61
TSPAN17-201ENST00000298564 SPRR2DP22532 72 aa4.96□□□□□ -1.61
TSPAN17-201ENST00000298564 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.9□□□□□ -1.62
TSPAN17-201ENST00000298564 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
TSPAN17-201ENST00000298564 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
TSPAN17-201ENST00000298564 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
TSPAN17-201ENST00000298564 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
TSPAN17-201ENST00000298564 MT3P25713 68 aa4.63□□□□□ -1.67
TSPAN17-201ENST00000298564 NEBP20929 6669 aa4.55□□□□□ -1.68
TSPAN17-201ENST00000298564 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
TSPAN17-201ENST00000298564 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
TSPAN17-201ENST00000298564 MT4P47944 62 aa4.4□□□□□ -1.7
TSPAN17-201ENST00000298564 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
TSPAN17-201ENST00000298564 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
TSPAN17-201ENST00000298564 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
TSPAN17-201ENST00000298564 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
TSPAN17-201ENST00000298564 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
TSPAN17-201ENST00000298564 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
TSPAN17-201ENST00000298564 LCE1DQ5T752 114 aa4.15□□□□□ -1.74
TSPAN17-201ENST00000298564 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
TSPAN17-201ENST00000298564 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
TSPAN17-201ENST00000298564 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
TSPAN17-201ENST00000298564 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
TSPAN17-201ENST00000298564 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
TSPAN17-201ENST00000298564 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
TSPAN17-201ENST00000298564 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
TSPAN17-201ENST00000298564 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
TSPAN17-201ENST00000298564 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
TSPAN17-201ENST00000298564 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
TSPAN17-201ENST00000298564 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
TSPAN17-201ENST00000298564 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
TSPAN17-201ENST00000298564 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
TSPAN17-201ENST00000298564 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
TSPAN17-201ENST00000298564 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
TSPAN17-201ENST00000298564 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
TSPAN17-201ENST00000298564 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.88
TSPAN17-201ENST00000298564 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
TSPAN17-201ENST00000298564 KRTAP5-7Q6L8G8 165 aa3.32□□□□□ -1.88
TSPAN17-201ENST00000298564 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
TSPAN17-201ENST00000298564 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
TSPAN17-201ENST00000298564 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
TSPAN17-201ENST00000298564 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
TSPAN17-201ENST00000298564 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
TSPAN17-201ENST00000298564 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
TSPAN17-201ENST00000298564 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 119.9 ms