RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 MT3P25713 68 aa2.2□□□□□ -2.06
GAPVD1-202ENST00000297933 KRTAP19-2Q3LHN2 52 aa2.2□□□□□ -2.06
GAPVD1-202ENST00000297933 KRTAP20-1Q3LI63 56 aa2.19□□□□□ -2.06
GAPVD1-202ENST00000297933 MT1MQ8N339 61 aa2.19□□□□□ -2.06
GAPVD1-202ENST00000297933 LPAP08519 4548 aa2.19□□□□□ -2.06
GAPVD1-202ENST00000297933 MUC17Q685J3 4493 aa2.19□□□□□ -2.06
GAPVD1-202ENST00000297933 ABCA13Q86UQ4 5058 aa2.17□□□□□ -2.06
GAPVD1-202ENST00000297933 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
GAPVD1-202ENST00000297933 KRTAP9-7A8MTY7 169 aa2.14□□□□□ -2.07
GAPVD1-202ENST00000297933 LCE1DQ5T752 114 aa2.14□□□□□ -2.07
GAPVD1-202ENST00000297933 TNXBP22105 4242 aa2.13□□□□□ -2.07
GAPVD1-202ENST00000297933 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
GAPVD1-202ENST00000297933 KRTAP9-4Q9BYQ2 154 aa2.12□□□□□ -2.07
GAPVD1-202ENST00000297933 UBR4Q5T4S7 5183 aa2.1□□□□□ -2.07
GAPVD1-202ENST00000297933 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
GAPVD1-202ENST00000297933 FSIP2Q5CZC0 6907 aa2.08□□□□□ -2.08
GAPVD1-202ENST00000297933 FLGP20930 4061 aaPredicted RBP2.08□□□□□ -2.08
GAPVD1-202ENST00000297933 RNF213Q63HN8 5207 aa2.07□□□□□ -2.08
GAPVD1-202ENST00000297933 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
GAPVD1-202ENST00000297933 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
GAPVD1-202ENST00000297933 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
GAPVD1-202ENST00000297933 FAT4Q6V0I7 4981 aa2.06□□□□□ -2.08
GAPVD1-202ENST00000297933 LCE5AQ5TCM9 118 aa2.05□□□□□ -2.08
GAPVD1-202ENST00000297933 MT1AP04731 61 aa2.03□□□□□ -2.08
GAPVD1-202ENST00000297933 PRM1P04553 51 aa2.02□□□□□ -2.09
GAPVD1-202ENST00000297933 LCE1AQ5T7P2 110 aa2.01□□□□□ -2.09
GAPVD1-202ENST00000297933 KRTAP19-7Q3SYF9 63 aa1.99□□□□□ -2.09
GAPVD1-202ENST00000297933 HMCN2Q8NDA2 5059 aa1.99□□□□□ -2.09
GAPVD1-202ENST00000297933 KRTAP2-2Q9BYT5 123 aa1.98□□□□□ -2.09
GAPVD1-202ENST00000297933 KRTAP2-1Q9BYU5 128 aa1.98□□□□□ -2.09
GAPVD1-202ENST00000297933 LCE4AQ5TA78 99 aa1.98□□□□□ -2.09
GAPVD1-202ENST00000297933 KRTAP4-9Q9BYQ8 210 aa1.97□□□□□ -2.09
GAPVD1-202ENST00000297933 SYNE2Q8WXH0 6885 aaKnown RBP1.96□□□□□ -2.1
GAPVD1-202ENST00000297933 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
GAPVD1-202ENST00000297933 MUC2Q02817 5179 aa1.93□□□□□ -2.1
GAPVD1-202ENST00000297933 KRTAP6-2Q3LI66 62 aa1.9□□□□□ -2.1
GAPVD1-202ENST00000297933 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
GAPVD1-202ENST00000297933 LCE1EQ5T753 118 aa1.89□□□□□ -2.11
GAPVD1-202ENST00000297933 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
GAPVD1-202ENST00000297933 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
GAPVD1-202ENST00000297933 SYNE1Q8NF91 8797 aaKnown RBP1.88□□□□□ -2.11
GAPVD1-202ENST00000297933 KRTAP4-11Q9BYQ6 195 aa1.85□□□□□ -2.11
GAPVD1-202ENST00000297933 USH2AO75445 5202 aa1.72□□□□□ -2.13
GAPVD1-202ENST00000297933 KRTAP9-6A8MVA2 160 aa1.72□□□□□ -2.13
GAPVD1-202ENST00000297933 OBSCNQ5VST9 7968 aa1.72□□□□□ -2.13
GAPVD1-202ENST00000297933 NEBP20929 6669 aa1.68□□□□□ -2.14
GAPVD1-202ENST00000297933 MACF1Q9UPN3 7388 aaKnown RBP1.67□□□□□ -2.14
GAPVD1-202ENST00000297933 KRTAP5-9P26371 169 aa1.66□□□□□ -2.14
GAPVD1-202ENST00000297933 KRTAP5-3Q6L8H2 238 aa1.65□□□□□ -2.14
GAPVD1-202ENST00000297933 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
GAPVD1-202ENST00000297933 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
GAPVD1-202ENST00000297933 KMT2DO14686 5537 aa1.62□□□□□ -2.15
GAPVD1-202ENST00000297933 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
GAPVD1-202ENST00000297933 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
GAPVD1-202ENST00000297933 MDN1Q9NU22 5596 aa1.52□□□□□ -2.17
GAPVD1-202ENST00000297933 KRTAP5-4Q6L8H1 288 aa1.52□□□□□ -2.17
GAPVD1-202ENST00000297933 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.49□□□□□ -2.17
GAPVD1-202ENST00000297933 MUC12Q9UKN1 5478 aa1.49□□□□□ -2.17
GAPVD1-202ENST00000297933 GPR98Q8WXG9 6306 aa1.48□□□□□ -2.17
GAPVD1-202ENST00000297933 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
GAPVD1-202ENST00000297933 MUC19Q7Z5P9 8384 aa1.34□□□□□ -2.2
GAPVD1-202ENST00000297933 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.2
GAPVD1-202ENST00000297933 KRTAP5-5Q701N2 237 aaPredicted RBP1.3□□□□□ -2.2
GAPVD1-202ENST00000297933 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
GAPVD1-202ENST00000297933 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
GAPVD1-202ENST00000297933 KRTAP5-8O75690 187 aa1.22□□□□□ -2.21
GAPVD1-202ENST00000297933 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
GAPVD1-202ENST00000297933 HMCN1Q96RW7 5635 aa1.18□□□□□ -2.22
GAPVD1-202ENST00000297933 KRTAP5-2Q701N4 177 aa1.17□□□□□ -2.22
GAPVD1-202ENST00000297933 KRTAP5-1Q6L8H4 278 aa1.12□□□□□ -2.23
GAPVD1-202ENST00000297933 AHNAKQ09666 5890 aaKnown RBP1.06□□□□□ -2.24
GAPVD1-202ENST00000297933 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
GAPVD1-202ENST00000297933 MUC5BQ9HC84 5762 aaPredicted RBP1.01□□□□□ -2.25
GAPVD1-202ENST00000297933 KRTAP5-7Q6L8G8 165 aa0.97□□□□□ -2.25
GAPVD1-202ENST00000297933 KRTAP21-2Q3LI59 83 aa0.9□□□□□ -2.27
GAPVD1-202ENST00000297933 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
GAPVD1-202ENST00000297933 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms