RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 SPRR2AP35326 72 aa6.71□□□□□ -1.34
NPM1-201ENST00000296930 K7ERS5 55 aa6.7□□□□□ -1.34
NPM1-201ENST00000296930 CAMK2N1Q7Z7J9 78 aa6.66□□□□□ -1.34
NPM1-201ENST00000296930 SVIPQ8NHG7 77 aa6.65□□□□□ -1.34
NPM1-201ENST00000296930 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
NPM1-201ENST00000296930 LCE1AQ5T7P2 110 aa6.61□□□□□ -1.35
NPM1-201ENST00000296930 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
NPM1-201ENST00000296930 KRTAP5-3Q6L8H2 238 aa6.54□□□□□ -1.36
NPM1-201ENST00000296930 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
NPM1-201ENST00000296930 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
NPM1-201ENST00000296930 SPRR2DP22532 72 aa6.49□□□□□ -1.37
NPM1-201ENST00000296930 KRTAP2-2Q9BYT5 123 aa6.49□□□□□ -1.37
NPM1-201ENST00000296930 KRTAP2-1Q9BYU5 128 aa6.49□□□□□ -1.37
NPM1-201ENST00000296930 PMAIP1Q13794 54 aa6.47□□□□□ -1.37
NPM1-201ENST00000296930 ROMO1P60602 79 aa6.43□□□□□ -1.38
NPM1-201ENST00000296930 TNP1P09430 55 aa6.31□□□□□ -1.4
NPM1-201ENST00000296930 KRTAP25-1Q3LHN0 102 aa6.28□□□□□ -1.4
NPM1-201ENST00000296930 KTN1-AS1Q86SY8 53 aa6.16□□□□□ -1.42
NPM1-201ENST00000296930 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
NPM1-201ENST00000296930 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
NPM1-201ENST00000296930 PRAC1Q96KF2 57 aa6.11□□□□□ -1.43
NPM1-201ENST00000296930 MT1EP04732 61 aa6.08□□□□□ -1.44
NPM1-201ENST00000296930 DSTQ03001 7570 aaKnown RBP6.07□□□□□ -1.44
NPM1-201ENST00000296930 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
NPM1-201ENST00000296930 KRTAP19-3Q7Z4W3 81 aa6.07□□□□□ -1.44
NPM1-201ENST00000296930 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
NPM1-201ENST00000296930 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
NPM1-201ENST00000296930 MT1GP13640 62 aa5.93□□□□□ -1.46
NPM1-201ENST00000296930 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
NPM1-201ENST00000296930 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
NPM1-201ENST00000296930 GPR98Q8WXG9 6306 aa5.82□□□□□ -1.48
NPM1-201ENST00000296930 MT1MQ8N339 61 aa5.8□□□□□ -1.48
NPM1-201ENST00000296930 MT1LQ93083 61 aa5.8□□□□□ -1.48
NPM1-201ENST00000296930 MT4P47944 62 aa5.67□□□□□ -1.5
NPM1-201ENST00000296930 HMCN1Q96RW7 5635 aa5.66□□□□□ -1.5
NPM1-201ENST00000296930 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.51
NPM1-201ENST00000296930 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
NPM1-201ENST00000296930 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
NPM1-201ENST00000296930 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
NPM1-201ENST00000296930 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
NPM1-201ENST00000296930 KRTAP5-5Q701N2 237 aaPredicted RBP5.33□□□□□ -1.56
NPM1-201ENST00000296930 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
NPM1-201ENST00000296930 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
NPM1-201ENST00000296930 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
NPM1-201ENST00000296930 KRTAP5-7Q6L8G8 165 aa5.22□□□□□ -1.57
NPM1-201ENST00000296930 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
NPM1-201ENST00000296930 A0A0A0MQY5 61 aa5.17□□□□□ -1.58
NPM1-201ENST00000296930 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
NPM1-201ENST00000296930 LUZP6Q538Z0 58 aa4.96□□□□□ -1.61
NPM1-201ENST00000296930 MT1AP04731 61 aa4.93□□□□□ -1.62
NPM1-201ENST00000296930 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.92□□□□□ -1.62
NPM1-201ENST00000296930 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
NPM1-201ENST00000296930 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
NPM1-201ENST00000296930 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
NPM1-201ENST00000296930 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
NPM1-201ENST00000296930 KRTAP6-2Q3LI66 62 aa4.71□□□□□ -1.66
NPM1-201ENST00000296930 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
NPM1-201ENST00000296930 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
NPM1-201ENST00000296930 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
NPM1-201ENST00000296930 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
NPM1-201ENST00000296930 MT3P25713 68 aa4.53□□□□□ -1.68
NPM1-201ENST00000296930 MUC5BQ9HC84 5762 aaPredicted RBP4.53□□□□□ -1.68
NPM1-201ENST00000296930 AHNAKQ09666 5890 aaKnown RBP4.52□□□□□ -1.69
NPM1-201ENST00000296930 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.7
NPM1-201ENST00000296930 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
NPM1-201ENST00000296930 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
NPM1-201ENST00000296930 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
NPM1-201ENST00000296930 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
NPM1-201ENST00000296930 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
NPM1-201ENST00000296930 INE1O15225 51 aa3.89□□□□□ -1.79
NPM1-201ENST00000296930 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
NPM1-201ENST00000296930 PRM1P04553 51 aa3.35□□□□□ -1.87
NPM1-201ENST00000296930 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
NPM1-201ENST00000296930 PHGR1C9JFL3 82 aa3.15□□□□□ -1.9
NPM1-201ENST00000296930 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
NPM1-201ENST00000296930 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
NPM1-201ENST00000296930 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms