RNA–Protein interactions for RNA: ENST00000296859.10

RAPGEF6-201, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-201ENST00000296859 KRTAP19-5Q3LI72 72 aa1.65□□□□□ -2.15
RAPGEF6-201ENST00000296859 KRTAP9-3Q9BYQ3 159 aa1.64□□□□□ -2.15
RAPGEF6-201ENST00000296859 LCE1DQ5T752 114 aa1.63□□□□□ -2.15
RAPGEF6-201ENST00000296859 MT1FP04733 61 aa1.61□□□□□ -2.15
RAPGEF6-201ENST00000296859 KRTAP4-8A0A0G2JLE6 195 aa1.61□□□□□ -2.15
RAPGEF6-201ENST00000296859 LCE5AQ5TCM9 118 aa1.6□□□□□ -2.15
RAPGEF6-201ENST00000296859 KRTAP4-1Q9BYQ7 146 aa1.6□□□□□ -2.15
RAPGEF6-201ENST00000296859 MT1GP13640 62 aa1.58□□□□□ -2.16
RAPGEF6-201ENST00000296859 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
RAPGEF6-201ENST00000296859 MDN1Q9NU22 5596 aa1.56□□□□□ -2.16
RAPGEF6-201ENST00000296859 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
RAPGEF6-201ENST00000296859 KRTAP20-1Q3LI63 56 aa1.56□□□□□ -2.16
RAPGEF6-201ENST00000296859 LCE3CQ5T5A8 94 aa1.55□□□□□ -2.16
RAPGEF6-201ENST00000296859 KRTAP4-7Q9BYR0 210 aa1.54□□□□□ -2.16
RAPGEF6-201ENST00000296859 LCE3EQ5T5B0 92 aa1.53□□□□□ -2.16
RAPGEF6-201ENST00000296859 KRTAP4-9Q9BYQ8 210 aa1.52□□□□□ -2.17
RAPGEF6-201ENST00000296859 SPRR2GQ9BYE4 73 aa1.52□□□□□ -2.17
RAPGEF6-201ENST00000296859 KRTAP4-11Q9BYQ6 195 aa1.51□□□□□ -2.17
RAPGEF6-201ENST00000296859 LCE3DQ9BYE3 92 aa1.48□□□□□ -2.17
RAPGEF6-201ENST00000296859 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
RAPGEF6-201ENST00000296859 LCE1EQ5T753 118 aa1.48□□□□□ -2.17
RAPGEF6-201ENST00000296859 LCE1FQ5T754 118 aa1.48□□□□□ -2.17
RAPGEF6-201ENST00000296859 LCE1AQ5T7P2 110 aa1.48□□□□□ -2.17
RAPGEF6-201ENST00000296859 KRTAP4-2Q9BYR5 136 aa1.47□□□□□ -2.17
RAPGEF6-201ENST00000296859 KRTAP9-6A8MVA2 160 aa1.46□□□□□ -2.18
RAPGEF6-201ENST00000296859 SYNE1Q8NF91 8797 aaKnown RBP1.46□□□□□ -2.18
RAPGEF6-201ENST00000296859 DSTQ03001 7570 aaKnown RBP1.45□□□□□ -2.18
RAPGEF6-201ENST00000296859 OBSCNQ5VST9 7968 aa1.45□□□□□ -2.18
RAPGEF6-201ENST00000296859 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
RAPGEF6-201ENST00000296859 KRTAP19-6Q3LI70 58 aa1.43□□□□□ -2.18
RAPGEF6-201ENST00000296859 MT3P25713 68 aa1.42□□□□□ -2.18
RAPGEF6-201ENST00000296859 KRTAP19-3Q7Z4W3 81 aa1.41□□□□□ -2.18
RAPGEF6-201ENST00000296859 KRTAP2-3P0C7H8 128 aa1.38□□□□□ -2.19
RAPGEF6-201ENST00000296859 KRTAP2-4Q9BYR9 128 aa1.38□□□□□ -2.19
RAPGEF6-201ENST00000296859 KRTAP9-8Q9BYQ0 159 aa1.38□□□□□ -2.19
RAPGEF6-201ENST00000296859 MT1XP80297 61 aa1.37□□□□□ -2.19
RAPGEF6-201ENST00000296859 KRTAP19-8Q3LI54 63 aa1.37□□□□□ -2.19
RAPGEF6-201ENST00000296859 FSIP2Q5CZC0 6907 aa1.36□□□□□ -2.19
RAPGEF6-201ENST00000296859 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
RAPGEF6-201ENST00000296859 GPR98Q8WXG9 6306 aa1.36□□□□□ -2.19
RAPGEF6-201ENST00000296859 MT1BP07438 61 aa1.35□□□□□ -2.19
RAPGEF6-201ENST00000296859 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
RAPGEF6-201ENST00000296859 MACF1Q9UPN3 7388 aaKnown RBP1.33□□□□□ -2.2
RAPGEF6-201ENST00000296859 KRTAP2-2Q9BYT5 123 aa1.32□□□□□ -2.2
RAPGEF6-201ENST00000296859 KRTAP2-1Q9BYU5 128 aa1.32□□□□□ -2.2
RAPGEF6-201ENST00000296859 MT1MQ8N339 61 aa1.3□□□□□ -2.2
RAPGEF6-201ENST00000296859 PRM1P04553 51 aa1.29□□□□□ -2.2
RAPGEF6-201ENST00000296859 KRTAP5-3Q6L8H2 238 aa1.29□□□□□ -2.2
RAPGEF6-201ENST00000296859 MT1LQ93083 61 aa1.29□□□□□ -2.2
RAPGEF6-201ENST00000296859 MT1EP04732 61 aa1.28□□□□□ -2.2
RAPGEF6-201ENST00000296859 KRTAP6-3Q3LI67 103 aa1.28□□□□□ -2.2
RAPGEF6-201ENST00000296859 KRTAP4-3Q9BYR4 195 aa1.28□□□□□ -2.2
RAPGEF6-201ENST00000296859 KRTAP5-5Q701N2 237 aaPredicted RBP1.22□□□□□ -2.21
RAPGEF6-201ENST00000296859 NEBP20929 6669 aa1.2□□□□□ -2.22
RAPGEF6-201ENST00000296859 MT1AP04731 61 aa1.2□□□□□ -2.22
RAPGEF6-201ENST00000296859 KRTAP6-2Q3LI66 62 aa1.19□□□□□ -2.22
RAPGEF6-201ENST00000296859 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
RAPGEF6-201ENST00000296859 KRTAP20-2Q3LI61 65 aa1.15□□□□□ -2.23
RAPGEF6-201ENST00000296859 KRTAP19-7Q3SYF9 63 aa1.12□□□□□ -2.23
RAPGEF6-201ENST00000296859 KRTAP6-1Q3LI64 71 aa1.1□□□□□ -2.23
RAPGEF6-201ENST00000296859 KRTAP5-4Q6L8H1 288 aa1.06□□□□□ -2.24
RAPGEF6-201ENST00000296859 KRTAP4-4Q9BYR3 166 aa1.05□□□□□ -2.24
RAPGEF6-201ENST00000296859 KRTAP5-9P26371 169 aa1.04□□□□□ -2.24
RAPGEF6-201ENST00000296859 KRTAP5-11Q6L8G4 156 aa1.03□□□□□ -2.24
RAPGEF6-201ENST00000296859 HMCN1Q96RW7 5635 aa1.01□□□□□ -2.25
RAPGEF6-201ENST00000296859 MUC5ACP98088 5654 aa0.96□□□□□ -2.26
RAPGEF6-201ENST00000296859 AHNAKQ09666 5890 aaKnown RBP0.93□□□□□ -2.26
RAPGEF6-201ENST00000296859 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
RAPGEF6-201ENST00000296859 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.27
RAPGEF6-201ENST00000296859 KRTAP5-1Q6L8H4 278 aa0.87□□□□□ -2.27
RAPGEF6-201ENST00000296859 MUC5BQ9HC84 5762 aaPredicted RBP0.87□□□□□ -2.27
RAPGEF6-201ENST00000296859 KRTAP5-7Q6L8G8 165 aa0.84□□□□□ -2.27
RAPGEF6-201ENST00000296859 KRTAP5-10Q6L8G5 202 aa0.81□□□□□ -2.28
RAPGEF6-201ENST00000296859 KRTAP5-8O75690 187 aa0.78□□□□□ -2.29
RAPGEF6-201ENST00000296859 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
RAPGEF6-201ENST00000296859 KRTAP21-2Q3LI59 83 aa0.69□□□□□ -2.3
RAPGEF6-201ENST00000296859 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms